Leptolyngbya sp. BL0902: GFS31_23270
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Entry
GFS31_23270 CDS
T10598
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lepb Leptolyngbya sp. BL0902
Pathway
lepb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lepb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS31_23270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lepb03019
]
GFS31_23270
03400 DNA repair and recombination proteins [BR:
lepb03400
]
GFS31_23270
Enzymes [BR:
lepb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFS31_23270
Messenger RNA biogenesis [BR:
lepb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GFS31_23270
DNA repair and recombination proteins [BR:
lepb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GFS31_23270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QQE65639
UniProt:
A0A7T5JF84
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All DBs
Position
complement(2489606..2491873)
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AA seq
755 aa
AA seq
DB search
MTMAQAATPVADFPSLEKALKHHFGYDEFRPGQRRVIEAALKNQDTLVIMPTGGGKSLCY
QLPALLKIGVMVVVSPLIALMQDQVAGLQDNGIAATFLNSSLDGEALRQREAALLRGDIK
LLYVSPERLQNLGFIQFLNNLSQTVGISGFAIDEAHCVSEWGHDFRPEYRRLHELRERFP
QISLLALTATATERVRQDIAQQLRLRDPLVQVSSFNRPNLFYEVRPKGRDGYQQLLQQVR
SQTGSGIIYCLSRKRVDELALKLTQDGESVLPYHAGLADEVRRDNQTRFIRDDVRLMVAT
VAFGMGINKPDVRFVIHYDIPRNIEGYYQESGRAGRDGEPAHCTLFLAYGDVATAEYLIG
QKPDETEQRIARQQLRQMVDYAESTVCRRQIQLSYFGETLAGLCHQCDNCTNPPPIEDWT
IEAQKFLSCVARCQERFGMMHIIDVLRGSKNQKVVNLGHDKLSTHGIGKDRSVEEWKLLG
RSLLHQRFVDETTDGFPVLKLNAASWQILRKQLTVEVAVPKDIKPVETRSTTESVKFDNA
PETVALLTELKALRKRLADQQSVPPYVVFHESTLKQMAQKRPKTLAEFGQLSGVGSRKLN
QYGDAFLDVIHQFCADNGLPTQPISTSAAPPITLPSNTNQPQTFSSRPQPVGNTHRLTLQ
LFQQGHSIEAIAQERGLKPVTIATHLELLILNGESINLDALVPPARQSTIRQVLDTKETF
ALSDLRERLGDSYSFDEIRLVRADWQREQSSVSES
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgactatggctcaggcggcaactcccgtggcggacttcccctccctcgaaaaagcgctg
aagcaccactttggctacgacgagtttcggcctgggcagcggcgggtgattgaggcagcg
ctgaagaatcaagacaccctggtgattatgcccacagggggtggcaagtcgctgtgttac
cagttgcccgcgttgttgaagattggcgtcatggtggtggtgtcgccgctgattgccctg
atgcaggatcaggtagcgggcctgcaagataacggcattgccgccacgtttttgaatagt
tccctggatggtgaggccctgcgccagcgggaagcggccctgctgcggggagacattaaa
ctgctctacgtatcgccggaacggttgcagaatctggggtttatccagtttctcaacaac
ctgagccagacggtgggcattagcggttttgccattgacgaagcccactgtgtgagcgag
tggggccacgattttcggcccgaatatcggcggctgcacgaactgcgggagcgcttcccc
cagattagtttgctagcgttgacggccaccgccacggaacgagtgcgccaagacattgcc
caacaactgcggctgcgagatccgctggtgcaggtttccagctttaatcggcctaatttg
ttctacgaagtgcgacccaaggggcgagacggctatcagcagttgctgcaacaggtcaga
tcgcaaacgggatcggggattatctactgcctcagccgcaagcgggtggatgaactggcc
ctaaagctgacccaagacggagaatcggtactgccctaccatgccggactggcggacgag
gtgcggcgcgacaaccaaacccgcttcattcgcgacgatgttcggctgatggtagccacg
gtggcctttggcatgggcatcaacaagcccgatgtgcggtttgtcatccactacgacatt
ccccgcaacatcgagggctactaccaagaaagcggacgggccggacgagatggcgaaccc
gcccactgcacgctatttttggcctatggcgatgtagccacagcggaatatttgattggc
caaaagcccgacgaaaccgagcagcgcatcgcccgccaacaactgcggcaaatggtggac
tatgccgaaagtacggtatgtcgccgccaaattcagctcagctactttggcgaaaccctg
gcggggctgtgccaccagtgcgacaactgcaccaacccgccccccatcgaagactggacg
attgaggcccaaaagttcctctcctgcgtggcccgctgccaagaacgcttcggcatgatg
cacatcatcgacgtcctgcgcggctccaaaaatcaaaaggtggtgaacctcggccacgac
aaactttccacccacggtatcggtaaagatcgctccgtcgaagagtggaaattactaggc
cgttccctcttgcatcagcgttttgtagacgaaaccaccgacggatttccggtactcaaa
ctgaatgccgcaagctggcaaattctccgcaaacaactcaccgttgaggtcgctgtaccc
aaggatatcaaacccgttgaaacccgatcaacgacggaatcagtcaagtttgataatgcc
cctgaaaccgtcgccctactgaccgaactcaaagctctccgcaaacgattggccgaccaa
caaagtgtgccgccctacgtcgtttttcacgaatcgaccctcaaacaaatggcccaaaaa
cggcccaaaaccttagcagagtttggccagctttccggtgtcggcagccgcaaacttaat
caatatggtgacgcttttttggacgttatccatcaattctgtgctgataatggcctccca
actcaaccgatttctacctctgccgcgcccccaatcactctcccatccaataccaaccag
ccccagactttcagcagccgtcctcaacccgttggcaacacccatcggctgaccctacaa
ctgttccagcagggccacagtattgaagccattgcccaagaacgcggcctaaaacccgtc
accattgctacccatctagaactgctgattctcaacggtgaatccattaacttagacgcc
ctagttccccccgcccgacaatccactatccgccaagttctagacaccaaagagaccttt
gccctcagcgacctccgcgaacgactgggagacagttactccttcgatgaaattcgccta
gtgcgggccgattggcagcgagaacaatcatcggtttcagaaagttaa
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