Leptolyngbya sp. BL0902: GFS31_23280
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Entry
GFS31_23280 CDS
T10598
Name
(GenBank) RNB domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lepb Leptolyngbya sp. BL0902
Brite
KEGG Orthology (KO) [BR:
lepb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lepb03016
]
GFS31_23280
Enzymes [BR:
lepb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GFS31_23280
Transfer RNA biogenesis [BR:
lepb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GFS31_23280
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
HTH_RNase_II
CSD_RNase_II
Fas1-AflB-like_hel
Mycobact_memb
Motif
Other DBs
NCBI-ProteinID:
QQE65640
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Position
complement(2491985..2494021)
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AA seq
678 aa
AA seq
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MEKGTLVEFKHQGQPRLGVVDRPEGKKNWVVMDDRGQSHTLHPREMSYEVVGERYTPADI
SAFLNEAEGYIDPSSLEVAWEFLTESEESADPASLAALLFSDQSPPLCYAAHRLLSEDKI
YFKQKGDRYEPRPASQVNEIKHQMERETQRQQEWESFMAKARQGLAGEAVAWDKTDRPRI
EVLERFALLGEESSQRNQAVELLNAMGCASTAAGAFDTLVAWGLWQPHENLALRRSQIPS
QFSEDTLTMVQQRLQSPPPDLDDPQRLDLTPLKVYTVDDASTQEIDDGLSLETLEDGRQR
IWIHIADPTRWVIPGDDLDLEARRRCTTVYLPTGIIPMFPAELATGPMSLVQGQICCALS
FGIVLGEAGDVQDYTIATSLIKPTYRLTYEDVDELLELGITAEPELHDLARWAQVRGQWR
VTQGAININMPESVIKVREAEDDIVIEVLEDSSARQMVAEMMILAGEVAAHYGQTHDLAI
PFRSQPQPELPSDEELIQLPTGWVRDSAIRRCMTRSEVGVTPSRHATLGLNSYSQVTSPI
RRYLDLIVHFQLKAHLRGDPPPFSSHEVTELAQGASTAAYEATLVERQTKRYWALEYLRR
NQSEVWDVMLLRWLREDDGLGLIMVEDLGLELAMRFNRSVALGEQFQVRVSHANPRQDII
RFEEVATEEADSSLAASA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagggaacattagtcgaattcaaacaccagggtcagccccgcctgggggtcgtt
gatcggcctgagggcaagaaaaactgggtggtcatggatgatcgtggccaatcccatacc
ctacatcccagagagatgagctatgaagtggtcggcgagaggtatactcccgccgacatt
tcagcatttttaaacgaggcggagggctatatcgacccctctagcctggaggtggcctgg
gaatttttgacggaatcggaggaatccgccgatccggcttccctggcggcgctgttgttt
tccgaccaaagcccgcccctgtgctacgcggcccatcggttgctgagcgaagataagatt
tatttcaagcaaaagggcgaccgctacgaacctcgccctgcgagtcaggtcaacgaaatt
aagcaccagatggagcgggaaacccagcgtcagcaggaatgggaatccttcatggccaag
gcgcgtcagggcttggcgggagaagccgtggcctgggacaaaacggatcgccctcgcatc
gaagtcctagaacgctttgccctgctgggggaggaatctagccagcgcaaccaggccgtg
gaattgctgaatgcgatgggctgtgcctcaacggcggcgggcgcatttgataccctagtg
gcatggggattgtggcagccccacgaaaatctggccctgcgccgcagccagatccccagc
caattctccgaggacaccctaactatggtgcagcagcggctccagtctccgccgcccgat
ctcgatgatccccagcgcctagacctgacccccctcaaggtctacaccgttgacgatgcc
agcacccaagaaattgacgacggcctcagcctcgaaaccctagaggatggtcgccagcgg
atttggattcacatcgccgaccccacccgctgggtgatccccggcgatgatttggacttg
gaagcccgccgccgctgcaccacggtctacctacccacgggcatcattcccatgttcccc
gccgagctggccaccgggccgatgagcctggtgcaggggcagatttgctgcgccctcagc
tttggcattgtcctcggcgaggctggggacgtgcaggattacaccatcgccaccagccta
atcaagcccacctaccgtctcacctacgaagacgtggacgaactgctggaactgggcatt
accgccgagccagaactgcatgacctagcccgatgggctcaggtgagagggcagtggcgg
gtgactcagggcgcgattaacatcaacatgcccgaatccgtcattaaggtgcgggaggcc
gaagacgacattgtgatcgaggtgctggaggattcttcggcccgtcagatggtggcggag
atgatgatcctagccggagaggtggccgcccactatggccaaacccacgacctcgcgatt
cctttccgcagccagccccagccagaattgccctccgacgaagaactgatccaactgcca
acgggttgggtgcgcgattccgccattcgccgctgcatgacccgcagtgaggtgggcgtg
acccccagccgccacgctaccctgggcctcaacagctacagccaagtcacctcccccatc
cgtcgctacctggatttgatcgttcacttccagctcaaggcccacctgcgcggcgatcca
ccgcctttttcctcccacgaagtgacggaacttgcccaaggggccagcaccgccgcctac
gaagccaccctggtagaacgccaaaccaagcgctactgggctttggaatacctgcgccgt
aaccaaagcgaggtgtgggatgtgatgctgctgcgctggctgcgggaggatgacggcctg
gggctgattatggtagaagacttgggcctagaactggccatgcgttttaaccgttccgtc
gccctaggggaacagttccaggtgcgggttagccatgccaaccctcgccaagacatcatc
cgctttgaagaagtggcgaccgaggaggccgattctagtctggcagcctccgcctaa
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