Leptolyngbya sp. BL0902: GFS31_26180
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Entry
GFS31_26180 CDS
T10598
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lepb Leptolyngbya sp. BL0902
Pathway
lepb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lepb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GFS31_26180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lepb03021
]
GFS31_26180
03400 DNA repair and recombination proteins [BR:
lepb03400
]
GFS31_26180
Enzymes [BR:
lepb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GFS31_26180
Transcription machinery [BR:
lepb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GFS31_26180
DNA repair and recombination proteins [BR:
lepb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GFS31_26180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
TonB_2
Motif
Other DBs
NCBI-ProteinID:
QQE65926
LinkDB
All DBs
Position
complement(2801079..2802953)
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AA seq
624 aa
AA seq
DB search
MAKLEQRFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKGI
PSYIAILLDMPLRDVEQIVYFNAYVVLDPGNAENLSYKQLLTEDQWIEIEDQLYDEDTEL
SGVEVGIGAEALQRLLQDLELETVAEKLREEIANSKGQKRAKLIKRLRVIDNFIATGSKT
EWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLQIHQCGLPREMAIELFQPFVIHRLIRQGVVNNIKAAKKMIQHSDNSDTVWEVL
EEVIESHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPL
SLEAQAEARLLMLASNNVLSPATGQPIITPSQDMVLGCYYLTADNPGATKGEGHYFANME
DAIMAFEQGLVDLHAKVWLRYDGPVESDQPEVLEQEEESGGIKTQVYSERRVRLDQEGNV
ISQYIKTTAGRIIYNKAVLEAIAS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctagaacagcggtttgactacgtcaaaattggattggcatcccctgaacgg
attcgccagtggggggaacgcaccctgcccaacggccaggtggtgggcgaagtcaccaag
ccggaaaccatcaactaccggacgctaaagccggagatggacgggcttttctgtgagcgg
atttttggccccgctaaggactgggaatgccactgcggcaaatataagcgggtgcgtcac
cggggcattgtctgcgagcgctgcggcgtggaagtgacggaatcgcgggtgcgccgtcac
cgcatgggctacatcaaactggccgctccggtggcccacgtgtggtacctgaagggcatc
cccagctacatcgccattctgctggatatgcccctgcgggacgtggagcagattgtctac
ttcaacgcctatgtggtgttggatcccggtaacgctgaaaacctcagctacaagcaactg
ctgacggaagatcagtggattgaaatcgaagaccagctctatgacgaagataccgaactc
tccggcgttgaggtggggattggggccgaagccctccagcgcttgctgcaagatttggaa
ctggaaaccgtggccgagaagctgcgggaggaaatcgccaactccaagggccaaaagcgg
gccaagctgatcaagcgcctgcgggtgatcgacaacttcatcgccaccgggtcgaaaacc
gagtggatggtgctggatgtgattcccgtcattccccccgacctgcgccccatggtgcag
ttggatgggggccgcttcgccacctccgacctcaacgacctctaccgtcgcgtcatcaac
cgcaacaaccgtttggcccgcctacaggaaatcctggccccggaaattatcgtccgcaac
gaaaagcggatgctgcaagaggccgtggatgccctgatcgacaacggtcgtcggggtcgc
acggtggtgggggccaacaaccgcccgctcaagtccctgtcggacatcattgaagggaaa
cagggccgcttccgccaaaacctgctgggtaaacgggtggactactctggccgttccgtc
atcgtggttggccccaagctgcaaattcaccagtgcggtctgcctcgcgaaatggctatt
gagttgttccagccctttgtgatccatcgcctgattcgccagggggtggtgaacaacatc
aaggccgccaagaagatgatccagcacagcgacaacagcgacaccgtctgggaagtgctg
gaagaggtgattgaaagccaccccgtcatgctgaaccgggcaccgaccctccaccgtttg
gggattcaggcctttgaaccgatcctggtggaaggccgcgccattcagcttcatcccctg
gtctgtcccgccttcaacgccgactttgacggcgatcaaatggctgtccacgtccccctc
tccctggaagcccaggccgaggcgcggctgctgatgctggcctccaacaacgtgctgtct
ccggccacggggcaaccgatcatcaccccctcccaggatatggtgttgggctgttattac
ctaacggcggacaaccctggggccaccaagggcgaagggcactacttcgccaacatggaa
gacgccatcatggccttcgagcagggcttggtggatctccatgccaaggtgtggctgcgc
tatgacggcccggtggagtcggatcagccggaggtactggagcaggaggaggaatccggc
ggcatcaagacgcaggtttactccgaacggcgggtgcgtctggatcaagagggcaacgtc
atttcccagtacatcaaaaccaccgcaggccgcatcatctacaacaaggccgttctcgaa
gcaatcgcaagctaa
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