Leptolyngbya sp. BL0902: GFS31_26250
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Entry
GFS31_26250 CDS
T10598
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lepb Leptolyngbya sp. BL0902
Pathway
lepb03410
Base excision repair
lepb03430
Mismatch repair
lepb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lepb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GFS31_26250
03430 Mismatch repair
GFS31_26250
03440 Homologous recombination
GFS31_26250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lepb03400
]
GFS31_26250
DNA repair and recombination proteins [BR:
lepb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GFS31_26250
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GFS31_26250
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GFS31_26250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QQE65933
UniProt:
A0A7T5E4P9
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Position
complement(2810063..2812198)
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AA seq
711 aa
AA seq
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MLWQRQLVPLEGVAGFLNPLEDDGGPMAYIPTPPGAFGLPMARAIDRLKRAMAQQETVTI
WGDFDADGVTATAVLWEGLGQLFDQGTTLHYYIPNRLRESHGLSKAGLDQVRDWGTGLIV
TCDTGSTNLEEVAYAQRLGMEVIITDHHTLPETDPAAVALINPRRFPTGHPLATLSGVAV
AYKLLEGLYESLDVPPHFALEHLLDLVAIGLIADLVDLTGDCRYLAQRGLKQLQTHLTDH
PPHPRPGVKELLTLCKKTGDRPTDISFGLGPRINAVSRIHGDARFCVELLTSQDAARCRK
LAYEAELANTRRKGLQRDLYRQVMDRVAALDLATTHCVILADEQWPTGILGLVAGQVSQT
LGRPTLLLTIDPPSSAESPETPRLARGSARSVPGLDLYNLFQSQADLLTSFGGHPLAAGL
TLPVERLAMFTTAMNRAVREALGSGIPQPSLTIDLTVTVADLGQDLFRELKLLEPYGMGH
PVPRLLIRNAWFANAFHRNLRDATNQGVGFIKTEFDLGDDTATAGFPGEWWGHYKEELPE
GRCDVVVELDHSQRQGYHVKLVDVRSAVGDTETVQPDVALTPDFGDFGLISGHLPRLNAS
LTAHAESINAASPITVWQTLAGMAKYLARTQTAVSRDYLRERLRISEVSLDLGLLALAAV
GLTPHCTTDVSGWIQIISDQPASPDPQPLKHFLEALAEEQFRQRYALGRSD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtggcagcgtcaactcgttcccttggagggggttgcgggtttcctcaacccccta
gaggacgacggtggcccaatggcctacatccccactccaccgggggcctttggtctgccg
atggcaagggcgatagatcgcctcaagcgggccatggcgcagcaggaaaccgtgaccatc
tggggtgattttgatgccgatggagtgacggctaccgccgttctgtgggaggggctgggt
caactctttgaccagggaactaccctgcattactacattcccaatcggctgcgagaatcc
cacgggctgtctaaggcagggctagatcaggtacgggactggggcacagggttgatcgtc
acctgcgacacgggcagcaccaacctggaggaagtagcctatgcccaacgcctgggcatg
gaggtgatcatcaccgaccaccacaccctaccggagaccgaccccgctgccgtagcgttg
attaatccccgcaggttccccacggggcatcccctggccaccctgtccggcgtggcggtg
gcctataagctgctagaggggctgtacgagtcccttgatgtcccgccacattttgccctc
gaacatctcctagatctcgtcgccattggcctcattgccgacctagtagacctcaccgga
gactgccgctacctggcccagcggggcttaaagcagctccaaacccacctgacagaccac
cctccccaccctcggccaggggtgaaagaattgctgaccctctgcaagaaaacgggggat
cggcccacggatatttcctttggcctagggccgcgcatcaatgccgtcagccgcatccat
ggcgacgcccgcttttgtgtggaactgctcaccagccaagatgcggcccgctgccgcaaa
ctcgcctacgaggcggaactggccaacacccgccgcaaggggcttcagcgagatctctac
cgtcaggtgatggatcgggtcgcggccctcgatctggcgacgacccactgcgtcattctg
gccgacgaacaatggcccacgggcattctgggtctggtggccggacaggtgagtcaaacc
ctcggtcggcccactctcctactcaccatcgatccccccagttccgcagaatccccagaa
acaccacgcctagccaggggttctgcccgatccgtccccggcctagacctgtacaatttg
ttccaatcccaggcagatttgctgaccagctttggcggacaccccctcgccgctggtctt
accctgcctgtggagcggctagccatgttcaccaccgccatgaaccgagcggtgcgggag
gccctgggcagcggcattccccagcctagtctcaccattgacctaaccgtgaccgtggca
gacttggggcaagacctatttcgagaactcaagctgttagagccctacggcatgggccat
cccgttccccggctgctaattcggaacgcttggtttgccaacgcctttcaccgcaatctg
cgcgatgccaccaaccagggggtcggcttcatcaaaaccgagtttgacctgggggacgat
accgccaccgcaggctttccgggggagtggtgggggcattataaggaggaactgcccgaa
ggccgctgtgatgtggtggtggagttggatcacagccagcgccagggctaccacgtcaag
ctggtggatgtgcgctctgctgtcggtgatacggaaaccgttcagcctgacgttgcccta
actcctgattttggcgattttggcctcatttctggccatctgccccgactgaacgccagc
ctaaccgctcatgctgagtctatcaacgccgcatctcccatcacggtctggcagaccttg
gcaggcatggccaaatacctagcccgcacccaaaccgccgtgtcccgcgattacctgaga
gaacggctaaggatttctgaggtttccctagacctgggcctgctggccttggctgccgtt
gggctcactccccactgcaccaccgacgtgtcaggttggattcaaattatctccgaccag
cccgccagccccgatccccaacccctaaagcacttcttagaagccctggccgaggagcag
tttcgtcagcgctatgccctgggtcgttcggactag
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