Leptolyngbya sp. BL0902: GFS31_28550
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Entry
GFS31_28550 CDS
T10598
Name
(GenBank) DNA/RNA helicase superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lepb Leptolyngbya sp. BL0902
Pathway
lepb03420
Nucleotide excision repair
lepb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lepb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GFS31_28550
03430 Mismatch repair
GFS31_28550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lepb03400
]
GFS31_28550
Enzymes [BR:
lepb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFS31_28550
DNA repair and recombination proteins [BR:
lepb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GFS31_28550
MMR (mismatch excision repair)
Other MMR factors
GFS31_28550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Intein_splicing
AAA_30
DEAD
CarD_TRCF_RID
Hint_2
Viral_helicase1
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QQE66157
UniProt:
A0A7T5E538
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All DBs
Position
3056001..3059441
Genome browser
AA seq
1146 aa
AA seq
DB search
MTNFLAPLNPAQRQAVEHFCGPLLVVAGAGSGKTRALTYRIANLVLTHRIDPENILAVTF
TNKAAKEMKERIEILFAEQDAQAKHGKSLSALSDYEQTKLKSQVYKNITKHLWIGTFHAL
CARILRFDIEKYQHPAGYRWTKSFSIFDESDAQSLVKTIVTQTLNLDDKKFNPRSVRFAI
SNAKNQKLSPDELEQEQPNYRGRVIADVYRHYQKALAENNALDFDDLILMPVYLFQQNEQ
VLAYWHKRFRHVLVDEYQDTNRTQYELIRLLATNGEEISEYENWDYRSVFVVGDADQCLP
PETEILTPKGLVPIQNLKVGSTVLSTRGQNQLLPATVTQINKGNFQGKIWCIRVGDRVLK
GTPHHILMARMVPLLDRYYVYLMFREDRGYRVGITTGQQSNDYGRKEIGFKVRVAQENAD
KLWVLKAVDTYEEAAYYEAYFAATYGLPTMVFHGKGRKLSISDETIFKLFSEIDTFTRAE
SLMRDLWLHPEFPHYRPQNGLRRQTINFTMFGNVRKESGRSSHRIQWSSNRADIAEKLSQ
AGYPIRPGKLPGTYRFETARNSYSEGLAIVKDAAEAGHLEIKRRALINSEIYNFLPLSHL
HSGMRVLVDVNGQLEEQDITEVWQEDYDGPVYDLEVEHSHSYLADGVLVHNSIYSFRAAD
FTILMNFQDDFGDGLPDDDTRTMVKLEENYRSTSNILEVANYLIDNNTERIDKVLRPTRG
EGESIFIYHADDEIAEANFVISQIRHLETQHPELNWGDFAILYRTNAQSRAFEEMLTRYG
IPYQVVGGMRFYDRREIKDVLAYLRLINNPSDTVSLKRVINVPKRGVGKGTLDKLEQAAQ
TLGVPLWEILSDETSVKTLAGRSARGVLEFASLVKNYQEDIANQKASTIIQGVLDDSGYL
AALKAEGTDEAEDRFGNVQELYNAVLQFEEENVDDPSLEAFLANASLASDLDDTKDGKNA
VSLMTLHSSKGLEFPVVFLVGLEEGLFPNYRSMEDPAALEEERRLCYVGITRAQERLFIS
HARERRLYGQREMASPSLFLSELPADLVSGNTPHRRPGKAKPGHTMTRTSTPMREAQKER
ESAARPGSGAHERDWKVGDVVVHKSYGAGQVTHIFGAGNKICLAIQFQSQGRKIIDPKLS
PLQRAE
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaccaactttctcgcccccctcaaccccgcccaacgccaagccgtcgagcacttctgc
ggcccgctgctggtggtggccggagccggatcgggcaaaacccgcgccctcacctaccgc
atcgctaacctggtgctcacccaccgcatcgatcccgaaaatatcttggccgtcaccttc
accaacaaagccgccaaggaaatgaaggagcgcatcgagattttgtttgccgaacaggat
gcccaggccaagcacggcaaatccctatcggccctgtcggattatgaacaaaccaagctc
aaatcccaggtctataaaaatatcaccaagcatctgtggattggtactttccacgctctt
tgtgcccgaattttgcggtttgacattgaaaaataccaacatcccgcaggctatcgttgg
acaaagagcttttcgatttttgacgaatccgacgctcaaagcctggtgaaaaccatcgtc
acccaaaccctcaatttggacgacaaaaagtttaaccctcgctccgtgcgtttcgccatc
agcaacgccaaaaaccaaaaactctcccccgatgaactagagcaagaacagcccaactat
cgcggacgggtgattgcggatgtctatcgccactaccaaaaagccctcgctgaaaataat
gccttagatttcgacgatctcattttgatgcccgtttacctgtttcaacaaaatgaacag
gtactcgcctactggcacaaacgttttcgccacgtcctagtggatgaataccaagatact
aaccgcacccagtacgaactcattcgacttttggcaactaatggcgaagaaatttctgaa
tatgaaaactgggattatcggtcggtttttgtggtcggagatgccgatcagtgcctccct
cccgaaacagagattctgactcccaaggggctagtacccatccaaaatctcaaagtgggt
agcaccgttctatcgactagggggcaaaatcagttattgcctgctaccgtcacccagatt
aacaaaggaaatttccagggaaaaatttggtgcattcgggtcggggatcgggtactgaag
ggaactccccatcacatcctcatggctcgtatggtgcccttgctagatcgctactatgtt
tacctcatgttccgcgaagatcgaggctatcgagtcggcatcacgaccgggcagcaatcc
aatgactatggacgcaaggaaattgggtttaaggttagagtggcccaagaaaatgcggat
aaactctgggtcttaaaagcagttgatacctacgaagaagccgcttattatgaagcttat
tttgccgccacctatggattgcccacgatggtcttccatggtaaaggtcggaagttgagc
atttcagatgaaactatctttaaacttttctctgaaatcgacaccttcacacgggccgaa
tcgctcatgcgagatctgtggctacatcctgaattccctcactatcgtccccaaaatggc
ctgcgtcgccagaccatcaacttcacgatgtttggaaacgttaggaaagaaagtggtcgt
tccagtcatcgtattcagtggtcatctaatcgagccgacattgcagagaaattgtcccaa
gccggatacccaattcgtcccggcaagttaccaggaacctatcgctttgaaaccgcccga
aattcctattcagaagggttggctattgttaaggatgccgcagaagcaggacatctagaa
atcaagcgtcgcgccttgattaatagtgagatttataatttcctgccactttctcacctg
cattctggcatgagggttttggttgatgttaatggccagctagaagaacaagacattaca
gaagtttggcaggaagactacgatggcccagtttatgatttagaagtagagcatagccat
agctacctagctgatggtgtgctagttcataactcaatttattcctttagggcggcagat
ttcaccattctgatgaactttcaggatgattttggcgatggcttgcccgatgatgatacc
cgcacgatggtcaagctggaggagaactatcgttccacgtccaatattctagaagtcgcc
aattacctgattgacaacaacaccgaacgcattgataaagtgctgcgtcccacccgtggc
gagggcgaaagcatttttatctaccacgccgacgatgaaattgccgaagcgaattttgtg
attagccaaattcgccacctagaaacccagcatccagaattgaactggggggattttgct
attctctaccgcaccaatgcccagtcccgtgcctttgaggaaatgctgacccgctacggt
attccctatcaggtggtgggtggaatgcggttctatgatcgccgtgaaattaaagacgtt
ctggcctacctgcggttgattaataatccctcagatacggtgagcctaaagcgagtgatc
aacgtgccgaaacgaggagtcggcaagggtactttggataaattggaacaagcagcccaa
accctaggagtgcccctgtgggaaattttgtctgacgaaacctcagtcaagaccttggcc
ggacggtcggctaggggcgtgttggaatttgcatcattggtcaaaaattatcaggaagac
attgcgaatcaaaaggcatctacgattattcagggtgtgctagatgacagcggataccta
gccgctctcaaagccgaaggtaccgacgaagccgaagatcgctttggcaacgtgcaggaa
ctttacaacgccgtgctgcaatttgaggaagaaaacgttgatgatccgtccctagaagcc
ttcttagccaatgcgtctttagcctcggatttagacgataccaaagacggcaaaaatgcg
gtttcgttgatgaccctccactcttctaaggggctagaatttccggtggtgtttttggtg
gggttagaggaagggttattccccaactatcgctctatggaagaccccgccgccctagaa
gaagaacgtcgtctttgctacgtgggcattacccgtgcccaggagcggctcttcatttcc
cacgctagggaacgccgcctctatggtcagcgagaaatggctagtccatcactttttcta
tctgaattacccgccgatttggtcagtggcaacactcctcatcgccgccctggcaaagct
aagccagggcatacgatgactaggacaagtacccccatgcgcgaggcccaaaaagagcgg
gaatctgccgcaaggccaggtagcggtgcccacgaacgcgactggaaagtgggggatgtg
gtggttcacaaatcctacggggcagggcaagtcactcacatttttggagctggaaataag
atctgccttgctattcaatttcagagccaaggacgtaaaattattgatcctaaactctct
cctttgcagcgggcagagtag
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