Leptolyngbya sp. BL0902: GFS31_35650
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Entry
GFS31_35650 CDS
T10598
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lepb Leptolyngbya sp. BL0902
Pathway
lepb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lepb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GFS31_35650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lepb03400
]
GFS31_35650
Enzymes [BR:
lepb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GFS31_35650
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GFS31_35650
DNA repair and recombination proteins [BR:
lepb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GFS31_35650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QQE66861
LinkDB
All DBs
Position
3793118..3793966
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AA seq
282 aa
AA seq
DB search
MPELPEVETVRRGLNRVTLHQAIVGGEVLLARTVAHPPSADAFWAGLRQTHLVEWQRRGK
YLLGQLANEADQPAGYLGVHLRMTGQLLWVDPTEPVQTHCRVRLFLEGNRELRYVDQRTF
GRLWWVPPGQDPASVMTGLQSLGPEPFDDAFSPAYLKERLARSQRPIKNALLDQALVAGI
GNIYADEALFLSGLRPTTLAHSISLPRLKKLHQAIRDVLTTSIESGGTTFSDYRDIYGTN
GNYGGVAWVYDREGQPCRACQSPIHRLKLAGRSAHYCHQCQR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgcccgaagttgaaaccgtccgccgggggctaaaccgcgttacgctgcat
caggcgattgtgggcggtgaggtgttgctagcccgcacggtggctcatcctcccagtgcc
gatgccttttgggctggactccgtcagactcacctggtcgaatggcagcgacggggcaag
tatttgctgggtcaattggcgaacgaagccgatcagcctgcgggctacctgggggtgcat
ctgcggatgaccgggcaattactgtgggttgatcctaccgaacccgtgcagacccattgc
cgggtgcggctttttttggagggtaatcgcgaactgcgctacgttgaccagcgcaccttt
ggccgtctgtggtgggtgccccccggtcaggatccggcctcagtgatgacggggctgcaa
tccctagggccagaaccctttgacgacgccttctctccggcttacctaaaggaacgcctt
gcccgcagccagcgccccatcaaaaacgccctgctggatcaagccctcgttgccggaatt
ggcaacatctacgccgacgaagcgctgttcctcagcggtctgcgccccaccaccctggcc
cacagcattagcctgccccgcctaaaaaagctgcaccaggccatccgcgacgtcctcacc
accagcatcgaatctggcggtaccaccttcagcgactaccgcgacatctacggcaccaac
ggcaactacggcggcgtggcctgggtctacgaccgcgaaggtcagccctgtcgagcgtgt
cagtcccccatccatcggctcaagctggccggacgttccgcccactattgccaccaatgc
cagcggtag
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