Leptolyngbya sp. BL0902: GFS31_38540
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Entry
GFS31_38540 CDS
T10598
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lepb Leptolyngbya sp. BL0902
Pathway
lepb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lepb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS31_38540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lepb03019
]
GFS31_38540
03016 Transfer RNA biogenesis [BR:
lepb03016
]
GFS31_38540
Enzymes [BR:
lepb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GFS31_38540
Messenger RNA biogenesis [BR:
lepb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GFS31_38540
Transfer RNA biogenesis [BR:
lepb03016
]
Prokaryotic type
tRNA degradation factors
GFS31_38540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QQE67142
LinkDB
All DBs
Position
complement(4121282..4123432)
Genome browser
AA seq
716 aa
AA seq
DB search
MQEIEKSISFDGRDIKLRVGLLAPQAGGAVLVQSGETAVLVTATRSTGREGIDFLPLLVD
YEERLYAAGRIPGGFLRREGRPPERATLISRLIDRPMRPLFPQWLRDDIQIVATTLSMDE
QVPPDVLAATGASVAVLLAKIPFNGPMAAVRVGLVGDDFVINPTYKEVENGDLDLIVAGS
PDGVIMVEAGANQLPEADMIEAIDFGYEVVQDLIKAQLDLIKELGIEIVKEAEPETDPTL
ATFIEEKTSASIKEVLKQFTLTKPERDEKLDAIKAELVTTIEALEDDHPVKAAVAANGKA
LGNTYKSVTKKLMRQQIVEEKVRVDGRKLDEVRPIYCQVGLLPERVHGTGLFQRGLTQVM
SVVTLGTPGDAQMMDDLHPDEEKRYLHHYNFPPYSVGETRPMRSPGRREIGHGALAERAL
VPVLPPKEDFPYVIRVVSEVLSSNGSTSMGSVCGSTLSLMDAGVPITKPVSGAAMGLIKE
GDEVRILTDIQGIEDFLGDMDFKVAGTDSGITALQMDMKITGLPIKVIAEAINQAKPARL
HILEKMMATIDTPRTTMSKYAPQLITFKIDPEMIGMVIGPGGKKIKAITEQTGAKVDIND
DGTVTVSCLSGEKARQAKAMIEAIVFKPSAGDVFVGTVMRVIPIGAFVEFMPGQEGMIHI
SQLADYRVAKVEDEVNVGDEVIVKVREIDGRGRVNLTRLNIHPDEAAAARAAAAAR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaattgaaaaatcaatatcctttgatggccgggacattaagctgcgggtcggc
ctgttagctccccaagcggggggtgcggtgctggtgcagtcgggggagaccgccgttttg
gtgacggccacccgatccacgggccgcgaaggaatcgactttttgcccctgttggtggac
tacgaagaacgcctctacgccgccggacgcatccccggtggctttttgcgtcgggagggt
cggcccccagaacgggccacgctgatcagccgtttgattgaccgccccatgcggccccta
ttcccccaatggctgcgggacgatattcaaattgtggccaccaccctgtcgatggatgag
caagtgccccccgatgtgctggcggcgacgggcgcttccgtggcggtgctgctggccaaa
attcccttcaatggccccatggcggcggtgcgtgtgggcctggtgggcgacgattttgtc
atcaaccccacctataaagaagtggaaaacggcgacctggatctaatcgtggcgggttcc
cccgacggcgtgatcatggtggaagccggggccaaccaactgcccgaagccgacatgatc
gaagccatcgactttggctatgaggtggtgcaagacctgatcaaggctcagctcgatctg
attaaggaactgggcatcgagatcgtcaaggaagccgagccggaaaccgatcccaccctg
gccaccttcatcgaagaaaagaccagcgcgtctattaaagaggtgctgaagcaattcacc
ctcaccaagccggagcgggacgaaaagctggacgccatcaaggccgagcttgtcaccacc
atcgaagcgctggaagacgatcatcccgtcaaagctgccgtagcggccaacggcaaagcc
ctgggcaacacctacaaatccgtcaccaaaaagctgatgcgtcagcaaatcgttgaggaa
aaggtgcgcgttgatggccgcaagctggacgaagtgcgccccatctactgccaggtgggc
ctcttgccagagcgcgtccacggcacggggctgttccagcgggggctgacccaggtgatg
tcggtggtgacgctagggactccgggcgacgcccaaatgatggacgacctccaccccgac
gaagaaaagcgctacctgcaccactacaacttccccccctactccgtgggtgaaacgcgg
cccatgcgctcccccggtcggcgggaaattggccacggtgccctggccgaacgcgcccta
gtgcccgtgttgccccccaaagaagacttcccctacgtgatccgggtggtgtctgaggtg
ctgtcctccaacggctccacctccatgggttccgtctgcgggtctaccctgtccctgatg
gatgccggggtgcccatcaccaagcccgttagcggtgcggccatgggtctgattaaggaa
ggcgacgaagtccgcatcctcaccgacatccagggcatcgaagacttcctgggcgacatg
gactttaaggtggcgggcaccgacagcggcatcaccgccctgcaaatggacatgaaaatc
accggactgcccatcaaggtgatcgccgaggccatcaaccaggccaagcccgctcgtctc
cacatcctggagaaaatgatggccaccatcgacaccccccgcaccaccatgtcgaagtat
gcgccgcagttgatcaccttcaagatcgaccccgaaatgatcgggatggtgatcggcccc
ggcggcaagaagatcaaggccatcaccgagcaaaccggagccaaggtggacatcaacgac
gacggtaccgtcaccgtgtcctgcctgtctggggaaaaggcgcggcaggccaaggccatg
atcgaagccatcgtcttcaagccctccgctggggatgtgtttgtgggcacggtgatgcgg
gtaattcccatcggtgccttcgtggaatttatgcccggtcaagagggcatgatccacatc
tcccaactggccgactaccgcgtggccaaggtggaggatgaggtgaacgtgggcgacgag
gtgatcgtcaaagtccgcgaaatcgacggtcggggccgcgtcaacctcacccgtctcaac
atccaccccgacgaagccgcagcagcacgggcagcggcggcggctcgttag
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