Leptolyngbya sp. IPPAS B-1204: EDM05_012185
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Entry
EDM05_012185 CDS
T10888
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Pathway
lepi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EDM05_012185 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lepi03019
]
EDM05_012185 (groL)
03110 Chaperones and folding catalysts [BR:
lepi03110
]
EDM05_012185 (groL)
03029 Mitochondrial biogenesis [BR:
lepi03029
]
EDM05_012185 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lepi04147
]
EDM05_012185 (groL)
Enzymes [BR:
lepi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EDM05_012185 (groL)
Messenger RNA biogenesis [BR:
lepi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EDM05_012185 (groL)
Chaperones and folding catalysts [BR:
lepi03110
]
Heat shock proteins
HSP60 / Chaperonin
EDM05_012185 (groL)
Mitochondrial biogenesis [BR:
lepi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EDM05_012185 (groL)
Exosome [BR:
lepi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EDM05_012185 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EDM05_012185 (groL)
Exosomal proteins of breast cancer cells
EDM05_012185 (groL)
Exosomal proteins of colorectal cancer cells
EDM05_012185 (groL)
Exosomal proteins of bladder cancer cells
EDM05_012185 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Radical_SAM
DUF7262
Motif
Other DBs
NCBI-ProteinID:
XQQ06982
LinkDB
All DBs
Position
complement(1330561..1332228)
Genome browser
AA seq
555 aa
AA seq
DB search
MPKIVVFDEESRQALERGVNALADAVRITLGPKGRNVVLEAKYGAPQIVNDGITIAKEIE
LEDPLENTGARLIQEVASKTKDLAGDGTTTATVLAQAMIREGLRNVAAGSNPVSLRRGIE
KTVEQILAEIAAIAKPIEGNEIEQVATVAAGSDPEVGAMIAEAMSKVGRDGVISVEESKS
LSTEMETVEGMQFDRGYISPYFVTDTERMICELEKPLILLTDKKISNIQDLVPVLEKIAR
AGQPLLIIAEDVEGEALATLVVNRLRGVLNVVAVKAPSFGERRKAVLQDIAVLTGGQMIS
EDIGLSLDMATLETLGNARKVTITKDTTTIVAEAPDKHALETRIAQIRRELAETDSEYDS
EKLQERLARLVGGVAVIKVGAATETELKDRKLRLEDALNATKAAVEEGIVPGGGTTLLHL
AQKMQDFKQTLDTDEQIGADIVIRALEAPLRQIAENAGVEGSVVVEKVKAMDFNHGYNAL
TNQFEDLVAAGIIDPAKVVRSALQDAASIAGMVITTEALVVEKPEKKKAAAPDMGGMGGM
GGMGGMGGMGGMGMM
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaattgttgtatttgatgaagaatcgcgtcaggcgttggagcgtggtgttaat
gccctagccgatgcggtgcggattactctgggacctaaaggccgcaacgttgttctggag
gcaaagtatggtgcccctcaaatcgtgaacgatggcatcacgattgccaaagaaattgag
ctggaagatccgttggaaaatacgggtgctcgtttgattcaagaagtggcttctaaaacc
aaagatttggctggagatggcactaccactgcaacggtgctggctcaggccatgattcgc
gaagggctgagaaacgtcgcagcaggtagcaatccggtcagtttgcggcgcggcattgag
aagactgtggaacaaattttggcagaaattgccgccatcgcgaagccgatcgagggcaat
gagatcgagcaagtggcaaccgtggctgctggcagcgatccggaagtgggcgcgatgatc
gccgaagcgatgagcaaagttggccgagatggtgtgatttcggtagaagaatcgaagtcg
ctttccaccgagatggaaaccgtcgaagggatgcagttcgatcgcggctacatttctcct
tactttgttaccgatactgagcggatgatttgcgaactggaaaagccgctgattctgctg
accgataagaaaattagcaacattcaagatctggttcccgttctagaaaaaattgcccgc
gccggtcagccgctgctgattatcgctgaagatgtggaaggcgaagcattggcaacactg
gtggtgaaccgactgcggggtgtgctaaatgtagtggccgtaaaggctccttcatttggc
gagcggcgtaaagcggtgctacaagatatcgccgttctgacaggtgggcaaatgatctca
gaggacattggcctcagtctcgatatggcgacgttagagacgttgggcaatgctcgcaag
gtgacgattaccaaagacaccaccacaattgtggccgaagcgcccgataaacatgcgctg
gagacccggattgcccagattcgccgggagttggccgaaaccgattctgagtatgactct
gagaagctgcaagagcgattggctcgcttggttggcggcgttgcggtcattaaggtagga
gccgccaccgaaaccgaacttaaggatcgcaaactgcgcctcgaagatgccctcaatgca
actaaggcggctgtcgaagaggggattgtgcccggtggtggcacgactctgctgcatctg
gcgcagaaaatgcaggacttcaagcaaactctagacaccgacgaacagattggggccgat
attgtgattcgggcactcgaagcaccgctgcggcaaattgccgagaatgctggtgtagaa
ggttcggtggtggtagaaaaagtcaaggcaatggacttcaaccacggctacaatgccttg
accaatcagtttgaagatttggtcgcggctggaattattgatccggcgaaagtagtccgt
tcggctcttcaggatgcagcctcgatcgctggcatggtgattaccaccgaagcactagtc
gtagagaagccggagaagaagaaggcggctgcacccgacatgggcggcatgggtggtatg
ggcggtatgggcggtatgggcggtatgggcggtatgggcatgatgtag
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