KEGG   Leptolyngbya sp. IPPAS B-1204: EDM05_016760
Entry
EDM05_016760      CDS       T10888                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
lepi  Leptolyngbya sp. IPPAS B-1204
Pathway
lepi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lepi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EDM05_016760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lepi03400]
    EDM05_016760
Enzymes [BR:lepi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     EDM05_016760
DNA repair and recombination proteins [BR:lepi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     EDM05_016760
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: XPM59112
LinkDB
Position
1865841..1866566
AA seq 241 aa
MATEDDQMDLFSAIAVNPKPAAAPDPNFDPELIPTSAKVPVLPGTYGSMEEMSLHCNRCH
RCDLGATRTYAVVGRGNPQAPILIVGEGPGQNEDETGLPFVGKAGQLLDKILESVKLTEA
DVFICNIVKCRPPGNRTPTQDEMDACRPYLLEQIRMVDPQIILLSGASAVRGLIGDKRGI
TKIRGEWIEWEGRLCMPVFHPAYLLRNPSREKGSPKWLMWQDIQAVRTKLDQLQQASADA
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atggctacagaagacgaccaaatggatctgttcagcgcgattgctgtcaatccgaaacct
gccgcagcccctgatccaaatttcgatccagagttaattcccaccagtgccaaagtgcct
gttctccctggaacctatggatcaatggaagaaatgtcgctgcattgcaaccgttgccac
cgctgcgacctaggggccacccgcacctatgccgtagtggggcgaggcaatcctcaagca
ccgattttgatcgtgggagaaggaccaggtcagaacgaggatgaaactggattacccttt
gtcggcaaagccggacagttgctcgacaagattttagagtcagtaaagctgaccgaggcg
gacgtttttatctgcaacattgtaaaatgtcgccctcctggtaaccgtactcctacgcag
gatgagatggatgcttgccgtccctatttgttggagcagattcgcatggttgatccacag
atcatcctgctatcaggagcatcggcggtccgagggttgatcggcgacaaacgcggcatt
accaaaatccgaggtgagtggatcgaatgggaaggacggctctgtatgccggtgttccac
ccagcctatttgctgcggaacccttcccgagagaagggcagtcccaagtggttaatgtgg
caggatattcaggcagtgcgcaccaagttggatcaacttcagcaagccagcgcagatgca
gattag

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