Leptolyngbya sp. IPPAS B-1204: EDM05_024815
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Entry
EDM05_024815 CDS
T10888
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lepi03016
]
EDM05_024815 (miaB)
Enzymes [BR:
lepi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
EDM05_024815 (miaB)
Transfer RNA biogenesis [BR:
lepi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
EDM05_024815 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
XPM60334
LinkDB
All DBs
Position
complement(2783628..2784995)
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AA seq
455 aa
AA seq
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MTEFPRRYHITTFGCQMNKADSERMAGILEDMGFQWSDSPEQADLVLYNTCTIRDNAEQK
VYSYLGRQAKRKHEQPNLTLIVAGCVAQQEGEALLRRVPELDLVMGPQHANRLQDLLEQV
FNGNQVVATEPVHIFEDITKPRRDSTVTAWVNVIYGCNERCTYCVVPSVRGVEQSRPPEA
IRAEMEELGRQGYKEVTLLGQNIDAYGRDLPGVTPEGRHQHTLTDLLYYIHDVAGIERIR
FATSHPRYFTERLIRACAELPKVCEHFHIPFQSGDNEVLKAMARGYTREKYCRIIDTIRH
YMPDAAISADAIVGFPGETEAQFENTLKLVDAIGFDQLNTAAYSPRPGTPAALWQNQLSE
TVKADRLQRLNHLVAIKAAERSQRYVGRIEAVLVEDQNPKDPSQVMGRTRSNRLTFCTGN
IAELKGQTVRVEIATARAFSLTGKRVDMPVAGATC
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtttccccgtcggtatcacatcactacgtttggctgccaaatgaacaaggcg
gactcggaacggatggctggcattctggaagacatggggtttcagtggtcagactctcct
gaacaagcggatttggttctctacaacacctgcacgatccgcgataacgccgagcagaaa
gtgtattcctatctcggtaggcaggccaagcgcaagcatgaacaacccaacttaactttg
attgtggcgggttgcgtcgctcagcaagaaggggaagccttgttgcgtcgggtgccggaa
ttggatttagtcatggggccgcagcatgccaatcggctgcaagatctgctagagcaggtg
tttaacggcaatcaggtagtggctaccgagccggttcatatctttgaagacatcaccaaa
ccgcgtcgggacagtactgtaacggcctgggtgaatgtaatttacggctgtaacgagcgc
tgtacctactgtgtggttcccagtgtgcgcggcgtcgaacaatcgcgtccaccagaggcg
attcgggctgagatggaggagttagggcggcagggctacaaagaagtgacgctactggga
caaaatatcgatgcttacgggcgggatttgcccggtgtgacgccagaaggtcggcatcag
catacactgacggatctgctgtactacattcacgatgtagcgggaattgaacggattcgg
tttgctactagccatccgcgctacttcaccgagcggttgattcgggcctgtgctgagtta
cccaaggtttgcgaacatttccatattccgtttcagtcgggcgacaatgaggtgctgaag
gcaatggcgcggggctatacccgcgaaaagtactgccgcattatcgacacaatccgccac
tacatgcccgatgctgcgattagcgccgatgcgattgtgggatttccgggtgaaaccgaa
gcccagtttgaaaatacgctgaagctggtcgatgccattggttttgatcagctcaatacg
gctgcctattcgccgcgtccgggtacaccggctgccctgtggcagaatcagctgagtgaa
acggtcaaagcggaccgattgcagcgtctaaaccatttggtggccattaaggctgctgaa
cgctcccagcgctatgtgggtcgcatcgaggccgtgctggtagaggatcaaaaccccaaa
gatccgagtcaggtgatgggtcgcacccgtagcaaccgccttactttctgcaccggcaat
attgctgaactcaaaggccaaaccgtgcgcgtcgaaatcgccactgctagggccttcagt
ttgacgggcaagcgagttgatatgccggttgctggagcaacatgctag
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