Leptolyngbya sp. IPPAS B-1204: EDM05_026970
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Entry
EDM05_026970 CDS
T10888
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lepi03009
]
EDM05_026970 (rimO)
Enzymes [BR:
lepi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EDM05_026970 (rimO)
Ribosome biogenesis [BR:
lepi03009
]
Prokaryotic type
ribosomal protein modification factors
EDM05_026970 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
XPM60653
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All DBs
Position
3024207..3025259
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AA seq
350 aa
AA seq
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MGNKPTIAISHLGCEKNRIDTEHMLGLLVQAGYQVDSNEELADYVIVNTCSFIQAAREES
VRTLVELAEANKKVVITGCMAQHFQQELLEAIPEAVAVVGTGDYHKIVDVIQRTETGERV
QEVSAEPVYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRSIESIVA
EAEQLAAEGVQEIILISQITTNYGLDLYGEPKLAELLLALGKVEVPWIRMHYAYPTGLTP
KVLDAIQSTPNILPYLDLPLQHSHPEVLRAMNRPWQGASTMASSNALRRRSPMPCCEPPL
SSAFRVKRKTTSSICCNLSSGMSLTMLAYLPFRQKRARLPMTCQISFLKQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaaaccaacgattgccatctctcatttaggctgcgaaaagaatcgaatcgat
accgaacatatgctggggctgctggtacaggcgggctatcaggtagactcaaatgaagag
ctggctgactatgtcattgtcaatacttgtagctttatccaggcggcacgggaagagtcg
gtgcgtaccctggtagagctggcggaagccaataaaaaagtggtaattactggctgcatg
gcgcagcattttcagcaggagttactggaagcgatcccggaagcggttgcggttgtaggc
acgggggactatcacaaaattgtagatgtgattcagcgcacggaaaccggcgaacgggtg
caggaagtttcggctgagccagtttacattgccgatgaaaccacgcctcgctatcgcaca
accaccgaaggcgtggcctacctgcgagtggccgaaggctgcgattatcgctgtgcgttt
tgcatcattccccatctgcgcggcaatcagcgatcccgttcgattgaatcgatcgtggcc
gaagcggaacagttggcggcggaaggggtccaggaaattattctgatctcccaaatcacc
accaactatggcttggatctgtacggcgaaccaaagctggcggaactgctgctggccctg
ggtaaggtcgaagtgccctggattcggatgcactatgcctacccgactggcttaacgcca
aaagtgctagacgcgatccagtcaacgcccaacattttgccctatctcgatttgccgctt
cagcattcccatcccgaagtgctgcgggcaatgaatcggccctggcagggcgcgtcaacg
atggcatcatcgaacgcattaagacggcgatccccaatgccgtgttgcgaaccaccttta
tcgtcggctttccgggtgaaacggaagaccacttccagcatctgctgcaatttgtccagc
ggcatgagtttgaccatgttggcgtatttaccttttcgccagaagagggcacgcctgcct
atgacttgccaaatcagcttcctcaagcagtaa
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