Leptolyngbya sp. IPPAS B-1204: EDM05_028275
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Entry
EDM05_028275 CDS
T10888
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lepi03009
]
EDM05_028275
Enzymes [BR:
lepi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
EDM05_028275
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
EDM05_028275
Ribosome biogenesis [BR:
lepi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EDM05_028275
23S rRNA modification factors
EDM05_028275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
S4_2
DUF6639
Motif
Other DBs
NCBI-ProteinID:
XPM60843
LinkDB
All DBs
Position
complement(3171089..3171919)
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AA seq
276 aa
AA seq
DB search
MKQRLDALLVERNLCESRQQAQRLIRAGEVMVNRQVIDKPGTEVDPTLAIEVKARSPYVS
RGGEKLARALQEFSITVDGRIGLDGGISTGGFTDCLLQAGAKLVYGIDVGYGQVAWKLRQ
DPRVILRERTNIRYLTAEDLYSSDHPRPDLGVVDVSFISLTKILPTLWSLLQPPREVVLL
VKPQFEVGRERIGKKGVVRDAKDQTDAILQVCAAAQSLGWQFGGLTWSPLPGPAGNIEYL
LWLLMQTPHAFPDATTVQHLTQTAQRSLKGQNVGEC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacaacgtctagacgctcttctggttgaacgcaacctctgtgagtcccgccagcag
gcccagcggctgattcgggctggagaagtgatggtgaatcgacaagtgattgacaaaccg
ggcaccgaagtagacccgacgttggcaattgaagtgaaggcgcggtcgccctatgtgtcg
cggggtggggaaaagctagccagggcgctgcaggagttctccattaccgtcgatggacgc
ataggattagatggtgggatctcaactggagggtttaccgactgtttgctgcaagctgga
gccaaactggtttacggcattgatgtgggctatggccaagttgcctggaagctgcggcag
gacccgcgcgtgattttacgagaacgcaccaatatccgctatttgaccgcagaggatttg
tatagctccgaccatccccgtcctgatttaggcgtggtagatgtatcgttcatttccttg
accaaaatcttgcccaccctctggagtctgctgcaaccgccacgggaagtggtgctgctg
gtcaaaccccagtttgaagtgggccgggaaaggataggcaaaaaaggcgttgtgcgcgat
gccaaagaccaaaccgacgcaattttgcaggtgtgtgcagcagcccagtcactgggctgg
cagttcggtgggttaacctggtcacccctacccggtccggcaggcaatattgagtatttg
ctgtggctgttgatgcaaactccgcatgcttttcccgacgcgaccacggtgcagcacctc
acccaaaccgcccaacgctcactcaaagggcagaacgttggtgagtgttag
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