Leptolyngbya sp. IPPAS B-1204: EDM05_038415
Help
Entry
EDM05_038415 CDS
T10888
Name
(GenBank) form I ribulose bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Pathway
lepi00630
Glyoxylate and dicarboxylate metabolism
lepi00710
Carbon fixation by Calvin cycle
lepi01100
Metabolic pathways
lepi01110
Biosynthesis of secondary metabolites
lepi01120
Microbial metabolism in diverse environments
lepi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EDM05_038415
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
EDM05_038415
Enzymes [BR:
lepi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
EDM05_038415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
XQQ05383
LinkDB
All DBs
Position
complement(4379642..4381072)
Genome browser
AA seq
476 aa
AA seq
DB search
MSYSQTKTQTKAGYQAGVKDYRLTYYTPDYTPKDTDILAAFRVTPQPGVPYEEAGAAVAA
ESSTGTWTTVWTDLLTDLDRYKGRCYDIEPVPGEDNQFIAYIAYPLDLFEEGSVTNMLTS
IVGNVFGFKALKALRLEDLRIPVAYLKTFQGPPHGIQVERDKINKYGRPLLGCTIKPKLG
LSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFTFVAEAIHKAQAETGEIKGHY
LNVTAPTCEEMIKRAEYAKELNMPIIMHDFLTAGFTANTTLSKWCRDNGILLHIHRAMHA
VIDRQKNHGMHFRVLAKCLRMSGGDHIHTGTVVGKLEGDKAVTLGFVDLLRENYVEQDRS
KGIYFTQDWASMPGVMAVASGGIHVWHMPALVEIFGDDAVLQFGGGTLGHPWGNAPGATA
NRVALEACVQARNEGRDLMREGGDIIREACRWSPELATACELWKEIKFEFEAQDTI
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattctcaaaccaaaacccagaccaaagctgggtaccaggcaggggttaaagat
tatcgcctgacgtactacacgcctgattacactcccaaagacaccgatattttggccgca
ttccgggtgactcctcagcctggagttccctatgaagaggcgggagcagcagttgcagct
gaatcgtctaccggaacctggacgaccgtatggactgacctgttgaccgatttggatcgc
tacaagggtcgttgctatgacatcgaaccggttcccggtgaagacaatcagttcatcgcc
tacattgcctatccgctggatctgttcgaggaaggctctgtcaccaacatgttgacctcg
attgtggggaacgtgtttggcttcaaagcgctgaaagctctgcgtctggaagacctgcgc
atcccagttgcctacctcaagaccttccaaggtccgccgcacggtatccaggttgagcgc
gacaagatcaacaagtatggtcgtccgctgctgggttgcacgatcaagccgaagctgggc
ctgtcggcaaagaactacggtcgggctgtttacgaatgtctgcgcggcggtttggacttc
actaaagatgacgaaaacatcaactcgcagccgttccagcgctggcgtgaccgttttacc
tttgtggctgaagcgattcacaaagctcaggcagagacgggtgaaatcaaagggcactac
ctcaacgtcacggctcccacctgcgaagaaatgatcaagcgggcggaatatgccaaagag
ttgaacatgcccatcatcatgcacgactttttgactgccggtttcaccgcgaatacaact
ttgtctaagtggtgccgtgacaacggtatattactccacattcaccgcgccatgcacgct
gtgatcgaccgtcagaagaaccacggcatgcacttccgcgtcttggcaaagtgtctgcgg
atgtccggcggcgaccacatccacaccggcaccgttgtgggtaagctggaaggtgacaag
gccgttaccctcggtttcgtagatctgctgcgggaaaactatgttgagcaagaccgctcc
aaggggatttacttcacccaagactgggcttcgatgccgggtgtgatggccgttgcgtcg
ggcggtatccacgtatggcacatgcctgctctggtagaaatctttggtgatgatgcggtg
ctgcaatttggtggtggtacgctgggtcatccctggggtaatgctccgggtgcaaccgca
aaccgggtagcgctagaagcctgcgttcaagctcggaacgaaggtcgtgacctgatgcgt
gagggtggcgacatcatccgtgaggcttgccgctggagccctgaactggcaactgcttgc
gaattgtggaaggaaatcaagttcgaattcgaggcgcaagacaccatttaa
DBGET
integrated database retrieval system
