Leptolyngbya sp. IPPAS B-1204: EDM05_053310
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Entry
EDM05_053310 CDS
T10888
Symbol
dnaK
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Pathway
lepi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EDM05_053310 (dnaK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lepi03019
]
EDM05_053310 (dnaK)
03110 Chaperones and folding catalysts [BR:
lepi03110
]
EDM05_053310 (dnaK)
03029 Mitochondrial biogenesis [BR:
lepi03029
]
EDM05_053310 (dnaK)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lepi04147
]
EDM05_053310 (dnaK)
Messenger RNA biogenesis [BR:
lepi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EDM05_053310 (dnaK)
Chaperones and folding catalysts [BR:
lepi03110
]
Heat shock proteins
HSP70 / DNAK
EDM05_053310 (dnaK)
Mitochondrial biogenesis [BR:
lepi03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
EDM05_053310 (dnaK)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
EDM05_053310 (dnaK)
Exosome [BR:
lepi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EDM05_053310 (dnaK)
Exosomal proteins of breast cancer cells
EDM05_053310 (dnaK)
Exosomal proteins of colorectal cancer cells
EDM05_053310 (dnaK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Motif
Other DBs
NCBI-ProteinID:
XQQ06208
LinkDB
All DBs
Position
6162519..6164483
Genome browser
AA seq
654 aa
AA seq
DB search
MGKVIGIDLGTTNSCVAVLEGGKPVVISNSEGGRTTPSIVGFGKTGERLIGQLAKRQAVT
NAENTVFSIKRFIGRRWNDTEDERTRVPYACVRGKDDTVDVQIRGKTYTPQEVSAMILQK
LKQDAENYLGEPVTQAVITVPAYFTDAQRQATKDAGTIAGLEVLRIINEPTAAALSYGLD
KQDQDQCVLVFDLGGGTFDVSVLQLGDGVFEVKATSGNNHLGGDDFDNVLVRWMMDNFLQ
QEGIDLSVDKMALQRLREAAEKAKIELSSMLTTSINLPFITADATGPKHLEMELTRAKFE
ELVGYLVQATIEPVTHALKDCDLTPDQIDRIILVGGSTRIPAVQEAIQDYFSGKTPDRSV
NPDEAVALGAAIQAGVLGGEVKDLLLLDVTPLSLGIETLGEVFTKIIERNTTIPTSKSQV
FSTATEGQTSVEIHVLQGERAMVRDNKSLGKFQLTGIPPAPRGVPQIEVSFEIDANGILR
VSARDKGTGREQSIQISNTGGLSEAEVERMRKEAEVYAEDDERRRQMVALRNQADTLLYS
YETTLRDNADFITDDLRALATEKVAELRAAIADRNTALEEMRSCIDALQQTLLTIGEAVY
QQAQAEASEELYDYDATTQTAPWANGHTPPEPPAEDYEEFVDDATITADYEAVD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagtcattggcatcgacctgggcacaacaaatagctgtgtagccgtgttagaa
ggcggcaagccggttgtgatttccaactctgaaggggggcgcaccactcctagcattgtt
gggtttggcaaaacaggagaacgtctgattgggcagcttgcaaagcggcaggctgtcacc
aatgccgaaaacaccgtttttagcatcaagcgattcattggccggcgctggaacgatact
gaagacgagcggaccagagttccctacgcctgtgtgcgcggcaaggatgataccgtcgat
gtccagattcgcggcaagacctatacacctcaagaggtttcagccatgatcttgcaaaag
ctgaagcaagatgctgaaaactacctgggtgagccagtgacgcaagcagtgattaccgtt
cccgcctattttaccgatgcccagcggcaggctaccaaagatgcgggcaccattgccggt
ctagaagtcctgcggatcattaacgaaccaaccgctgctgccctgtcctatggtctcgat
aagcaagatcaggatcagtgcgtgctggtgtttgacctgggtggcggtacgtttgacgtg
tcggtgctgcaattgggtgatggcgtatttgaggtgaaagccacctccggcaacaaccac
ttgggcggtgatgattttgacaacgtcctggtgcgctggatgatggataacttcctgcag
caggaaggaattgacctatctgttgataagatggcgctgcaacgcctgcgggaagctgca
gagaaagccaagattgagctttccagtatgttgaccaccagcatcaacctaccctttatt
acggcagatgccacaggtccaaaacatctggagatggagttaacccgcgccaaatttgag
gagctggtgggttatctggtccaggccactatcgagccagtcacccatgccctcaaagat
tgcgacctcacacccgatcagattgatcgaatcattttggttggtgggtcaacacgaatt
cccgccgtgcaagaagcaattcaagactactttagcggcaaaactcccgaccgctcggtt
aacccagacgaagccgtggcgctgggagcggcaattcaggcgggcgttttgggaggcgag
gttaaagacttgctgctgctggatgtgacgccactgtcgcttgggattgagaccctgggc
gaagtcttcactaaaattatcgagcgcaatacgaccattcccaccagcaaatcccaggtt
ttctccaccgctaccgaaggccaaacgtctgttgaaatccatgtgctgcagggcgaacgg
gcgatggtacgagacaacaagagcttgggtaagttccaactcaccggcattccccctgcg
cctagaggcgtgcctcaaatcgaagtctcgtttgagatcgacgccaatggtattctgcgc
gtttcagcccgcgacaaaggcactggacgagagcagagcatccaaatcagcaacacgggt
ggcttgagtgaggccgaagtcgagcggatgcggaaagaagccgaggtgtacgccgaagac
gatgagcggcgtagacaaatggtggctctccgcaaccaggcagacaccttgctctacagc
tatgaaacaaccctgcgcgacaatgccgatttcatcaccgatgacctgagagccttggcg
actgagaaagttgctgaactgcgagctgcaattgccgaccgcaatactgctctggaagag
atgcgctcttgcattgacgccctgcagcaaaccttactcacgatcggtgaggcagtgtat
cagcaggctcaggccgaggcatccgaagaactctatgattacgatgccacgacccaaacc
gcgccttgggctaacggtcatacgccacccgaaccaccagctgaggattacgaagagttt
gttgatgatgccacgattaccgcagactacgaggcagtcgattga
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