Leptolyngbya sp. IPPAS B-1204: EDM05_60220
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Entry
EDM05_60220 CDS
T10888
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Pathway
lepi00300
Lysine biosynthesis
lepi00470
D-Amino acid metabolism
lepi01100
Metabolic pathways
lepi01110
Biosynthesis of secondary metabolites
lepi01120
Microbial metabolism in diverse environments
lepi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EDM05_60220 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EDM05_60220 (dapF)
Enzymes [BR:
lepi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
EDM05_60220 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XQQ07315
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All DBs
Position
complement(2002715..2003557)
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AA seq
280 aa
AA seq
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MAIEFVKYHGLGNDFILIDNRHSPEPCLTPEQAVAWCDRHFGIGADGVIFALPGQDGTDY
TMRIFNSDGSEPEMCGNGIRCLAKFIADLNNQSEAIYRIHTLAGVITPKLNPDGQVTVDM
GVPRLLAAEIPTTLTAADAKVVDVPLQVAGKTWQVTCVSMGNPHCITFVEDVIAIPLAEI
GPQFEHNSAFPQRINTEFIEVVNPNYLKMRVWERGAGITLACGTGACASLVAGVLNSKCD
RRATIELPGGCLEIEWADNQRLYMTGPATRVFEGVLSSKF
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgagtttgtcaaatatcacggtttgggcaacgattttattctgattgataac
cgacattccccagaaccttgcctaacacccgaacaagctgttgcttggtgcgatcgccat
tttggaatcggagctgatggggtaatttttgcattaccgggtcaggatggcacagactac
acaatgcggatttttaactccgatgggtctgaaccggaaatgtgcggtaatggcattcgc
tgtctcgccaaattcattgccgatctaaacaatcaatccgaagctatctaccgcattcac
accttagcgggggtaattaccccaaaactcaatccagatggacaggtcacggtggacatg
ggtgtacctcgcctattggcggctgaaattcccaccacgctgacggcagccgatgcaaaa
gtggtcgatgtcccgctgcaagtggcgggaaaaacctggcaggtcacctgcgttagcatg
ggcaatccccactgcatcacctttgtcgaggatgtcatcgcgatcccgctagcagaaatc
gggcctcagtttgaacataattcagcctttcctcagcgtatcaacaccgaatttatcgag
gtcgtgaacccaaactacctgaaaatgcgggtctgggaacggggagctggcatcacgttg
gcctgtggtaccggagcctgtgcctctctagttgccggtgttctaaacagtaaatgtgac
cgacgtgccaccattgaacttccgggcggctgcctagaaattgagtgggcagacaaccag
cggctttatatgactggaccagcaaccagagtgtttgaaggagttttgagttctaagttt
tga
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