Leptolyngbya sp. IPPAS B-1204: EDM05_60345
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Entry
EDM05_60345 CDS
T10888
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Pathway
lepi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EDM05_60345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lepi03021
]
EDM05_60345
03400 DNA repair and recombination proteins [BR:
lepi03400
]
EDM05_60345
Enzymes [BR:
lepi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EDM05_60345
Transcription machinery [BR:
lepi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EDM05_60345
DNA repair and recombination proteins [BR:
lepi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EDM05_60345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XQQ07352
LinkDB
All DBs
Position
complement(2072903..2073850)
Genome browser
AA seq
315 aa
AA seq
DB search
MAQFQVECVESDTGDDRSSYSKFVLEPLDRGQGITVGNALRRVLLSNLEGAAVTAVRIAG
VSHEFMTVPGVREDVLDILLNMKEVVLKSYSSQPQIGRLRVEGPATITAGYFDFPAEVQV
IDPEQYIATLAAGHTLEIECRVEKGIGYRAIERGRDETSALDFLQIDSVFMPVRKVNYTV
EDARVGGSLEKDRLILEVWTNGSLTPQEALSQAADILVGLFNPLREIDFAPIDDADEIDV
DPANQIPIEELQLSVRAYNCLKRAQINSVADLLDYTQEDLLEIKNFGAKSAEEVIQALQD
RLGITLPHDKSSRST
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggcacagtttcaagttgagtgtgtggaatcggataccggggatgaccgcagctcctac
agcaagtttgtgctggaaccgctcgatcgagggcagggaattacggtcggcaatgcgctg
agacgggttctgctgtctaacctagaaggggctgcggtgacggctgtacggattgcggga
gtatctcatgagtttatgactgtccccggcgtgcgggaagatgtgctggacatcttgctg
aacatgaaggaggttgtcctcaaaagctattcatcccaaccgcagattgggcggctgcga
gtggaagggccagcgacaatcaccgcaggttacttcgactttccagcagaagttcaagtg
atcgatccggagcaatatatcgccacgctggcggcagggcatacgttagagatcgagtgc
cgagttgaaaaggggattggctatcgggccatcgagcggggccgcgacgaaacgtcagcc
ctggactttttgcaaatcgactcggtgtttatgccggtccgcaaggtgaactacaccgtg
gaagatgccagggtgggtggctcactagagaaagaccgtctgattctggaagtttggacc
aacggtagcctgacgcctcaagaagccttgagtcaggctgctgatattttggttggcttg
ttcaatccgctgcgggaaattgattttgcgcctattgatgacgccgacgagattgatgtc
gatccagctaatcaaattccgatcgaggaactgcagctatcggtgcgagcctataactgc
ctgaagcgtgctcaaattaactcggttgcggatttgttggactacacccaggaagacttg
ttggagatcaagaactttggagccaaatcggctgaagaggtgattcaagctctacaggat
cggttgggcatcacgctaccccacgataaatcctctcggtctacctag
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