Leptolyngbya sp. IPPAS B-1204: EDM05_65320
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Entry
EDM05_65320 CDS
T10888
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lepi03009
]
EDM05_65320 (der)
Ribosome biogenesis [BR:
lepi03009
]
Prokaryotic type
GTPases
EDM05_65320 (der)
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
GTP_EFTU
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
Roc
Ras
ABC_tran
Arf
MMR_HSR1_Xtn
KTI12
Motif
Other DBs
NCBI-ProteinID:
XQQ05434
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Position
4487799..4489160
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AA seq
453 aa
AA seq
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MPLPVVAIVGRPNVGKSTLVNRLSGIMDAIVHDEPGVTRDRTYRPAFWRDRDFLVVDTGG
LVFDDNTEFLPLIREQVMLALAEASVAVMVVDGQTGLTTADETIATWLRQQPVPVLLAVN
KCESPDQGLTQAAEFWQLGLGEPYPVSGIHGSGTGDLLDEVINYLPPTDALEDTEEIRVA
IVGRPNVGKSSLLNAFVGEQRAIVSPISGTTRDTIDMIVQRQDRRYRLIDTAGIRKKKQV
EYGPEFFGINRSFKAIRRADVVLLVLDALDGVTEQDQKLAGRVADDGRACVLVVNKWDAI
EKDSHTIYDYERLLKERLHFTDWAETIFVSAHTGQRVEKILDLVDSAAEQHRRRVSTSVI
NEALEEALKWHTPPTTRQGRQGKIYYGTQVASQPPTITLFVNDPKLFNENYRRYMERQFR
QQLGFQGTPIRLFWRGKKVRELEQSANRATKVK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaccagttgtcgccattgtaggacgccctaacgtagggaaatcgaccctagta
aatcgtctttctggcattatggatgctattgttcatgacgagccaggagtgacacgagat
cgcacctaccgtccggccttctggcgcgatcgagattttttggttgttgatacgggcggt
ctagtctttgatgacaacacagaatttctgccgctgattcgagagcaggtgatgttggca
ttggcagaggccagcgtagcggtgatggtcgtggatggtcaaacaggcttaacgaccgcc
gatgaaacgattgcgacttggttgagacagcagcccgtacccgtcctgttagccgtcaac
aaatgtgaatcaccagaccagggattgactcaggctgccgagttttggcaattgggctta
ggcgaaccctatccggtttcaggtattcacggtagcggcaccggcgatttgctcgacgaa
gtgatcaattacctaccgccaaccgatgcgctggaagacaccgaagaaatccgcgtcgct
attgtaggccgtccgaacgtcggcaaatctagcttgctgaatgccttcgttggcgagcaa
cgggccatcgttagcccaatttcaggcaccacccgcgacacgatcgatatgatcgttcaa
cggcaggaccggcgctatcgattgattgacacggctgggattcgcaagaaaaagcaggtg
gaatacggtccagaattcttcggcattaaccgttcctttaaggcgatccggcgagccgac
gtggtgctgcttgtactggatgcgttagatggcgtcaccgagcaagaccagaagctagcc
ggacgagtggcagatgatggccgtgcctgtgtgctggtagtaaacaagtgggatgcaatc
gagaaagactcccataccatctacgactatgagcggctgttgaaagaacggctacatttc
acagattgggctgaaaccatttttgttagcgcccacaccggccagcgagtcgagaaaatt
ttagatttggtggacagcgccgctgagcaacaccgccggcgtgtcagcacttcggtcatc
aacgaagccttagaagaagccttgaaatggcacactccgcccactactcgacaaggccga
caaggaaaaatttactacggcacccaagtcgccagccaaccgcccacgatcacgctattt
gtcaacgatcccaagctgttcaacgaaaactaccggcgctatatggaacgtcagtttcgg
cagcagctcggctttcagggaacaccgattcgcctattctggagaggcaaaaaagttcga
gaattagagcagagcgctaaccgtgccaccaaagtgaaatag
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