Leptolyngbya sp. IPPAS B-1204: EDM05_68100
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Entry
EDM05_68100 CDS
T10888
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Pathway
lepi03030
DNA replication
lepi03410
Base excision repair
lepi03420
Nucleotide excision repair
lepi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EDM05_68100 (polA)
03410 Base excision repair
EDM05_68100 (polA)
03420 Nucleotide excision repair
EDM05_68100 (polA)
03440 Homologous recombination
EDM05_68100 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lepi03032
]
EDM05_68100 (polA)
03400 DNA repair and recombination proteins [BR:
lepi03400
]
EDM05_68100 (polA)
Enzymes [BR:
lepi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EDM05_68100 (polA)
DNA replication proteins [BR:
lepi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EDM05_68100 (polA)
DNA repair and recombination proteins [BR:
lepi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EDM05_68100 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EDM05_68100 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Pyrid_ox_like
HHH_5
VP4_helical
Pom
Motif
Other DBs
NCBI-ProteinID:
XQQ06093
LinkDB
All DBs
Position
5914494..5917421
Genome browser
AA seq
975 aa
AA seq
DB search
MPADQPKLLLIDGHSLAFRAYFAYAKGRDGGLRTSTGIPTSVSYGFLKALLDTLEAEKPQ
YLVVAFDMGEPTFRHEADETYKAGRPETPEDFIPDIQNLQELLVAMNLPVVTAAGYEADD
IIGTLARRANGAGWRVKILSGDRDLFQLIDPEAQTTVLYLSTTFGRGTPPPKEFGVEQVK
DKMGILPSQVVDYKALCGDSSDNIPGVKGIGDKTAVTLLNTYGSLEKVYASLDEMKGAVR
QKLEAGKADACRSQYMAQIHLDVPLDISLEQCKLQGFDDEKLVPLLEKLEFRSFLSKINQ
IQQTLGGEVPAVPASESAASSKGKSGSKPQAKQDLAESDDLWFFSAEETETSQRVSQAAI
QPHIIDTAAKLQQLVDRLLAHTDAATPVAWDTETTSLDPLDAELVGIGCCWGAGLADMAY
IPVGHQAGGNLDKALVLDSLRPVWESAQYPKALQNAKYDRLVLRRQGIELKGVVFDTMLA
SYVLNPETSHNLSDLGLRYLDLLSQSYTDLVAKGKSIADLDIPSVAEYCGMDAYLVFQLV
PKLRAELEQFPQLHRLLLEVEQPLEPVLAEMEYHGIRIDQEYLRQFSQKLEQDLVNIEQR
AYAAAGETFSLGSPKQLSELLFNKLGLDRKKSRKTKTGYSTDAATLEKLQGDHPVVDAIV
EYRTLAKLKSTYVDALPALVRSDTKRVHTDFNQAITSTGRLSSSNPNLQNIPIRTAFSRQ
IRAAFIPEPGWLMVAADYSQIELRILAHLSQEPVLLETYQNNQDIHTLTARLLFQKDEIS
PEERRLAKVINFGVIYGMGAQRFARESGFKTADAKVFIERFNREYSRVFAYLQQMQQEAI
ARGYVTTIKGRRRYFNFASDSLKRLRGTDPSHIELAKLKLRDQYDAQLLRAAANAPIQGS
SADIIKIAMVKLHEILKSRRAHLLLQVHDELVFEIHPDEWQELQPQIKTTMESAVELTVP
LLVEVRTGQNWMEAK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgatcaacccaaactgctcttgatcgacggtcactcgctcgcctttcgggcc
tattttgcctacgctaaaggacgagatggcggcctgcggacctctaccggcattcccacg
agtgtctcctatgggtttcttaaagcgctgctggataccctagaggccgagaaacctcag
tatctggtcgtggcctttgacatgggcgaaccgacctttcgccatgaggccgacgaaacc
tacaaggcgggcagacccgaaactccagaagactttatccccgatatccagaacctgcag
gaactgttggtagcaatgaatctgccggtagtgacggcagcgggctatgaagccgatgac
attattggtaccctggcgcgacgagccaatggcgcgggctggcgagtgaagattctttcc
ggcgatcgggatttgtttcagctgattgatccagaggcgcagacaaccgtcctctacctc
agtaccacctttggccggggcaccccgccccccaaagagttcggagtagagcaagtcaaa
gacaaaatgggcattttgccctcccaggtggtggactacaaagccctctgcggcgactcg
tccgataacattcctggcgtcaaggggattggtgacaaaacggctgtcaccctgctcaac
acctacggttcgctagaaaaggtgtatgcctcgctggacgagatgaaaggagccgtgcgg
caaaagctggaagctggcaaagccgatgcctgtcggtcccaatatatggcccagattcat
ctagatgtaccgctggatatcagcttagagcaatgcaaactgcaaggatttgacgatgag
aaactggtgccgctgctagaaaaactagagttccgctcgtttttaagtaaaatcaaccaa
attcagcaaacgctaggcggagaagttccagccgttcccgcatcggaatctgcagcttct
agcaagggcaaatcgggcagcaaaccccaagccaagcaggacctagccgaatccgatgac
ctctggttctttagcgccgaagaaaccgaaaccagtcagcgcgtcagtcaggccgcgatt
cagccccacattattgacacggcagcaaagctgcaacagctggtggatcgcctcctcgcc
cataccgatgctgccactcccgtcgcctgggacaccgaaaccacttcgctggatccgctc
gacgctgagctggttggaattggctgctgttggggagccggtttggctgatatggcctat
attccagtcgggcaccaggctggcggcaatcttgacaaagctctagtgctggactcgctg
cggcccgtttgggaaagcgcccagtatcccaaggcgctgcaaaacgccaaatatgaccgg
ctggtgctgcggcggcaaggcattgagctgaagggcgtcgtgtttgatacgatgctagcc
agctatgtgctcaatcctgaaaccagccataacctaagtgatttgggcttgcgctatctg
gatttgctctctcagagctacaccgatttggtggcaaagggcaaaagtatcgctgattta
gatatcccctcagttgcagaatactgcggcatggatgcctatctagtgtttcagctcgtg
cccaaactgcgagccgagctagagcaattccctcagctgcatcggttgttgttggaggtg
gagcagccgctggaacccgtgctagccgaaatggagtaccacggtattcgcattgaccag
gagtatctacgccagttctcgcagaagctagagcaagatttggttaacatcgagcagcga
gcttacgccgcagcaggtgaaacctttagcctcggttctcccaaacagctcagcgaattg
ctgtttaataagctgggcctggaccgcaaaaaatcgcgcaaaaccaaaaccggctattct
accgacgccgccacgctggaaaaactgcaaggcgatcatcctgttgtagatgcaattgta
gaatatcgcactctagcaaaattaaagtcaacctacgtggatgcgttacctgctctagtc
cgttcagatactaagcgagttcacactgacttcaaccaagcaattacctcaaccgggcgt
ttatcgtcctcgaatcccaatctgcaaaatattccaattcggactgcttttagtcgtcaa
atccgcgctgcctttatccccgaacccggctggctgatggtagccgccgattattcccaa
attgaactgcggattctggcccatctgagtcaggagccggtcctgctggaaacctaccaa
aataaccaagatattcataccctgacggctcgcttactgtttcaaaaagacgagatcagt
cccgaggaacgccggttagcaaaggtgatcaactttggcgtcatctacggcatgggagcg
cagcgctttgcccgcgagtctgggttcaaaaccgccgatgccaaagtcttcatcgagcga
ttcaaccgcgaatattcccgtgtgtttgcctatttgcagcagatgcagcaagaagcgatt
gcccgtggctatgtcaccaccatcaagggccgcagacgttacttcaactttgccagcgat
agcctgaagcgattgcgcggcaccgatcccagccacattgagctagccaaactgaaattg
cgtgaccaatacgacgcccagcttttgcgcgccgctgccaacgccccgattcaaggctcc
agcgctgacattatcaagatcgccatggtgaagctgcacgagattctcaaaagtcgccgc
gctcacctgttgctgcaagtccacgatgaactcgtgtttgaaatccaccccgacgaatgg
caagaactacagccccagatcaaaaccacaatggaatctgcggtagagcttacagtgccg
ctgttggtagaagtgcgaactgggcagaactggatggaggcgaagtag
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