Leptolyngbya sp. IPPAS B-1204: EDM05_68420
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Entry
EDM05_68420 CDS
T10888
Symbol
crtH
Name
(GenBank) carotenoid isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Pathway
lepi00906
Carotenoid biosynthesis
lepi01100
Metabolic pathways
lepi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
EDM05_68420 (crtH)
Enzymes [BR:
lepi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
EDM05_68420 (crtH)
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Thi4
HI0933_like
Pyr_redox_2
FAD_binding_3
GIDA
GDI
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
XQQ06166
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Position
6073750..6075348
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AA seq
532 aa
AA seq
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MPIASQPSDFGVSTELSASPSRAVESAESRQPSETSQEFDVIVIGSGIGGLVTATQLAAK
GANVLVLERYLIPGGSAGYFERAGYRFDVGASMIFGFGEQGTTNLLTRALKAVNVSLETI
PDPVQIHYHLPNGLALKVHRDYEKFLQELSARFPHEQQGIRQFYDQCWQVFNCLNAMELL
SLEEPRYLTRVFFQHPLACLGLVKYLPQNVGDIARRYIRDPELLQFIDMECYCWSVVPAD
RTPMINAGMVFSDRHYGGINYPKGGVGQIAQKLVEGLEKAGGQIRYKARAVEIICENGRA
TGVRLATGEVYRARRIVSNATRWDTFEKLLPPEKMPRSEQKWQQRYQKSPSFFSLHLGVK
AEVLPAGTECHHILLEEWSQMEAAYGTIFVSIPTLLDPSLAPAGYHIIHTFTPCWIEDWQ
HLSSADYTAKKEEIAAQIVNRLEVLFPGLAAGLDYQEAGTPRTHRRFLGRMDGTYGPIPT
RKLLGLLGMPFNRTAIPGLYCVGDSTFPGQGLNAVAFSGFACAHRVAVDLGL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcgcttctcaaccctctgattttggcgtctctaccgaattgtcagcatccccc
agtcgtgcagttgagagtgccgaatctcgccaacccagcgagaccagccaagaattcgat
gtgattgtgatcggctcgggaattggtggcttagttacagcaactcagcttgcagccaag
ggagccaacgtgctggtgctagagcgctatttgattccaggaggcagtgcgggctatttt
gaacgagcgggctatcgctttgatgtgggtgcttcgatgatttttggtttcggagagcag
ggcaccactaatttgctgactcgcgccttgaaagcggtgaacgtcagcctagagactatc
cccgacccggtacagattcactaccatctgccgaacggtttggcactaaaagtccaccga
gattatgagaaatttttgcaagaactctcggcccgctttccccatgagcagcaaggcatt
cgccagttttatgaccagtgctggcaggtgttcaactgcctgaatgcgatggaattgctg
tcgctggaggaaccccgctacctaacccgagtgtttttccagcatcccttggcctgtttg
gggttagtgaagtatttgcctcaaaacgtaggagacattgcccgtcgctacattcgagat
ccagagctactgcaatttatcgatatggaatgctactgctggtccgtggtgccggcggac
cggacgcccatgattaatgcaggcatggtattcagcgatcgccactatggcggcatcaac
tatcccaagggcggcgtcggccaaatcgctcaaaagctggtcgaaggactggagaaagca
ggcggccagattcgctacaaggcgagagctgtcgaaattatctgtgaaaatgggcgggcc
acaggcgtgcgtttggctacgggagaagtgtatcgggccagacgaattgtttcgaacgcc
acccgctgggacacgttcgagaagctgctgcccccggaaaagatgccccgctctgagcaa
aagtggcaacagcgctatcaaaaatctcctagcttttttagtctgcacttgggagtaaaa
gccgaagtcctaccagccggaaccgagtgtcaccatatcctgctggaagagtggtcgcag
atggaagcggcctacggcacaatttttgtttccattcctaccttgctcgatcccagcttg
gctccggcaggctaccacatcatccatacctttactccctgctggattgaggattggcaa
catctgtcctctgcggactataccgctaagaaagaagagattgccgctcagatcgtcaac
cgcctagaagttttgtttccaggattagcagccgggttggattatcaagaagccggaaca
ccacgcacgcaccggcgctttctgggccggatggacggtacctatggcccgattccgacc
cgtaaactgctgggtctattgggtatgcccttcaaccgtaccgcgattcctggcctctat
tgcgtgggagacagtacctttccaggtcaggggctaaatgctgtggctttctctggtttt
gcctgtgcccatcgggttgcggtcgatttggggctatga
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