KEGG   Leptolyngbya sp. 7M: JVX88_00340
Entry
JVX88_00340       CDS       T09998                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
lept  Leptolyngbya sp. 7M
Pathway
lept03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lept00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JVX88_00340 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lept02044]
    JVX88_00340 (tssM)
Secretion system [BR:lept02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JVX88_00340 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_helical IcmF_C MMR_HSR1 DUF2754
Other DBs
NCBI-ProteinID: QYO65269
LinkDB
Position
complement(81398..84958)
AA seq 1186 aa
MASWHMDQLKYALGLGGIMSFYGVVGLIVVLLPEDTMGWNYKIVTIGLVLLTLPFALIIM
FVASRKSKKRERREAAAASAAETASEAPAQHRVATPSGNFGDLNAGAEEVVQFLKSSDLG
EGGRDAIYSLPWYLVAGAPKAGKSSLIITSNLNFKNLPSQRQSELRTVRPTPNIDWRIST
DAVFIDTAGRYQTEGVDGEEWSALLETIKKYRGNRPIDGFILVVNAETILKGDEREVEEL
AKVLRTRLDDAISRLKVRFPVYLVFTHSDTIEGFRDSFSSSKNEDKTLVWGATIPLEKSE
NAQALFDGEYEILQNSIMKRRSLRLSAPFPPLRQLRIFNFPLHFSSARRRFGAFVNTLFR
PSPFSENPFLRGFYFTASPANAGDGGRASVKNGFFTERLMRDVFLRDKDIVKTFIAQRQK
PPILGWFLTILGALIVVTLLALSAISLISNKQMLSETESVVGKAITLRQSDAGQDILTKQ
PNAVRAELDTMDDLRDLASRLDRYEREGAPLSMRFGMYSGNRVLHERVLPIYFRLVETRF
AAPTIEKVKAELKKFSESPQTFNVGKLSEEEVKLLGQQYNLLKAYLMLTSQHADKAESTH
LVTTLKDFWLSESKVQPELHLAAIQHLEFWARQVDRGPDRGAFRRTDVDKELVENARKKL
QAFPPVQRYYRRMVTEISKQIDDQGETTVSGLLSRRNADSSLLTGTVPVQGVYTRAGYEL
MKKAISEAPSKLTEEDWVIGDQNRSQIAQEGDTSVLNEIYLRDYADQWRAFVKGVDVVKF
ANAREAESALLAFSQANSPIEILAVEIAKNTNLSAPIDDGGWISWIKGLIFGAGDQTVGS
SQPEKDFRPLFDFVGKRGDTENAPITRYRSELALLARELTGKSDDEMKRIATEMAGEEPR
DRLKIGTREKNISGMLSSFNDAQTPGAQEMAIFLQKPIDRLKALLGADAKSQLAKAWTDQ
ILPAAREIEKGYPFEDGQADADLTKLTEFLAPNKGKFSEFYDKRLSSYFEEVGGQLRLKE
NAEVKFTDEFISYLNNAMNLRRVLFGSSETPKFEYEFRLRPISGALVEATIEGTKATSEG
TGAFKGTFPGSGAELGVLLNLASTSATTGSSDSNTSSGPEQLKFAGVWGVFRFVDAGKPQ
KQASGEYVLTHTVSGKTITSTIRPSGGDLFDKSIFRQVKAPDSFIK
NT seq 3561 nt   +upstreamnt  +downstreamnt
atggcttcctggcacatggatcaactgaaatatgctcttggcctcggtggcattatgtcg
ttctacggggttgtcggattgatcgtggtcctgctgccggaagacacgatgggatggaat
tacaagatcgtaacgatcggacttgttctgctaacacttccatttgcattgataataatg
ttcgttgcctctagaaagagcaagaagcgcgaacgaagggaagcagcggcggcgtccgct
gcggaaacggcgtctgaagcacctgcacaacatagagtcgccacgcctagtggaaacttt
ggtgaccttaatgcgggtgccgaagaggttgtccagtttctgaaaagctctgaccttggt
gaaggcggccgcgatgctatttattctttgccctggtatctggttgccggagcaccgaaa
gcagggaagagttcgcttatcataacttcgaacctcaatttcaagaatcttccgagtcaa
cgacagtcagaactaagaaccgttcgtccaacgcctaatatagattggcgcatatcgact
gacgctgtgttcatagacaccgcgggcagataccagaccgaaggtgtcgatggcgaagaa
tggtcggctttactggaaacgatcaagaaataccgaggcaatcgcccgatcgatggattc
attcttgttgttaatgcggagaccatattaaagggcgacgaacgggaggttgaagagctt
gcaaaggtcctgcgtacccgactggatgacgccatttcgcgattgaaggtaagatttccc
gtttatttggtctttacacattcagatactattgaaggattccgtgattcgttctcaagc
tcgaaaaacgaggataagaccttggtctggggggcaacgatcccgcttgaaaaaagtgag
aatgcccaagcgttgttcgatggtgaatatgagatcctgcagaattccataatgaagcga
cgctccctgcgtctttccgcaccttttccgccgctccgtcaattaaggatctttaatttc
ccattgcatttcagctcagcacgacgcagatttggtgcgtttgtaaacacactttttagg
ccgagtccttttagtgagaatccgtttctccgaggtttttatttcactgcatcgccagca
aacgcgggcgatggcggaagagcttccgttaagaacgggttctttacagaacggctgatg
cgggacgtgtttcttcgggacaaagatatcgtaaaaaccttcatcgctcagcgtcagaaa
ccgccgatcctcggatggttcttgaccattctaggagcgttgatagttgttactttgcta
gcgctttccgctatctcgcttataagcaacaaacagatgcttagtgagacagagtctgtt
gttggaaaggctatcacgctcaggcagtcagacgcgggccaagacattctgacaaagcaa
ccgaatgcggtaagagcggaactcgatacgatggacgatcttcgcgacctagcctcacgg
cttgatcggtatgaacgagaaggtgctccgctctcgatgcgattcggaatgtattcgggg
aatcgtgtcttgcatgaacgggtacttcctatctattttcgtttggtcgaaacgcggttt
gctgctccgactattgagaaggtaaaggctgagcttaaaaagttcagcgaaagcccgcag
acgttcaatgttggcaagctttcggaagaagaggtcaaactgctcgggcagcagtataat
cttctaaaggcatacttgatgttgacaagccagcatgcggataaagccgaatcaacccat
ttagttacgactcttaaagatttttggctaagcgaatcaaaagttcagccggaattgcat
cttgcagcaattcagcaccttgaattctgggccaggcaggtagatcgcggtccggacagg
ggagctttcaggcggaccgatgttgataaggaactcgtcgagaatgcccgcaaaaaattg
caggcgttcccaccggttcagcggtactaccgacgaatggtaacggagatatcgaaacag
atcgatgatcagggcgaaacaaccgtctctggattactttcgcgcaggaatgcagattcc
agccttcttacgggaacagtgccggtacaaggagtttatacccgtgccggatatgaactc
atgaagaaggcgatttcggaagcaccttcgaagctgaccgaggaagactgggtgatcggt
gaccaaaaccgttcccagatcgcacaggaaggcgatacttcagtgcttaacgagatttac
ctacgggattatgcagatcaatggcgggcattcgtcaaaggggtggatgttgtcaaattc
gcgaatgctcgggaagccgaatcagcgcttttggcattttcacaagccaattcgcctata
gagatacttgccgttgagatcgcaaaaaatacaaatctatcggcacctatcgatgatggt
gggtggatttcgtggataaaggggctgatctttggggctggcgaccaaacggttggcagc
tcccaacctgagaaggattttcgtccgttgttcgattttgtcggtaaacgcggtgatacg
gaaaatgccccgatcacgcggtatagaagtgaattggctttgcttgcacgtgaactcact
ggcaagtccgatgatgagatgaagcggatcgctactgaaatggccggtgaggagccgcgc
gaccgtctgaagataggaacacgggaaaagaacatcagcggaatgctcagctctttcaac
gatgctcagacacccggtgcccaggagatggcgatattccttcagaagccgatcgatcga
ttgaaggctctgcttggtgctgatgcgaagagccagcttgccaaggcatggaccgatcag
atccttccggctgctcgcgagatcgaaaagggttatccattcgaggacggccaagccgat
gcagacctgactaagctgaccgagtttctcgcacctaacaaaggcaaattctcagaattc
tacgataaacgactatctagttatttcgaggaagttggtggccaattgcggctaaaagag
aatgcagaggtgaagtttaccgatgagtttatttcctatctgaataatgctatgaatttg
cggcgggttttgtttggttcaagcgaaacgccgaagttcgaatacgaattcagactccgc
ccgatcagcggggctcttgtcgaagccacgatcgagggcaccaaggcgacctcagagggg
acaggtgccttcaaggggacattccccggaagcggggctgagctgggtgttcttctgaac
ttagcttcaacaagtgcgactaccggatcgtccgattcgaacacatcctccggtccggaa
cagttgaagtttgcaggcgtttggggcgtcttccggtttgttgatgccggaaaacctcaa
aagcaggcctcgggcgaatatgttctgacgcatacggtttccggcaaaaccataacttcg
acaatacggccaagcggcggcgacctgtttgataagtcgatctttaggcaggtaaaagcg
cctgatagtttcattaaatga

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