Leptolyngbya sp. 7M: JVX88_01415
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Entry
JVX88_01415 CDS
T09998
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lept
Leptolyngbya sp. 7M
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lept03016
]
JVX88_01415 (truB)
Enzymes [BR:
lept01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JVX88_01415 (truB)
Transfer RNA biogenesis [BR:
lept03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JVX88_01415 (truB)
Prokaryotic type
JVX88_01415 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QYO65474
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All DBs
Position
303476..304417
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AA seq
313 aa
AA seq
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MDGILIIDKPAGITSHDVVNTVRRILGIRRVGHTGTLDPFATGVMVVLVGKATRLARFLD
KDEKEYEALMRIGFETDTGDRTGKKIEEEGIPHPFMTDMRAILVAMMGFFDEIEQIPPMF
SAKKINGQKLYERARRGENVERKPVKVEIHEMMLFENNGKWPWPPHDLLARTKDVGLRVV
CSAGTYIRTLAEDIARAAGTRAHLAELDRTRSGRFKKEMAISLEELEAMPHPGSALLPLE
EAVSHLPAFELPPERVSPTLKGLSTRIKETDRLIPDTDYRMISPQKELVAIGSFDPHENV
IRPKLVLGGDNRS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggatggcattctgataattgacaagccagcaggcataacttcgcacgacgttgtgaat
acggtgcgtcggattttaggcatcagacgtgtaggacataccggcacgctcgatcctttc
gcgaccggtgtcatggtagttcttgttgggaaagcaacccgtctggcacgttttcttgac
aaggatgaaaaagaatatgaagccctgatgcgtatcggatttgaaactgatacgggagat
cggaccggcaaaaagatcgaagaggagggcatccctcatccatttatgacagatatgcga
gctattctcgtcgcgatgatgggcttctttgacgagatagaacagatcccgccgatgttc
tccgcaaagaagatcaacgggcaaaagctgtacgaacgtgcgcgaagaggtgagaacgta
gagcgaaaaccggttaaagtcgagatacacgaaatgatgttgttcgaaaataatggaaaa
tggccttggcctccccacgatctgcttgcgcggacaaaagacgtcgggctccgggtcgtg
tgttcggcgggcacttatatccggacactcgccgaggatattgcacgcgcggcagggaca
agggcacatctcgctgagcttgacagaacacgctccgggcgttttaagaaagagatggcg
atctcacttgaggaacttgaagctatgccgcatcctggatcggctctgttaccattagag
gaagcagtttctcacctgcccgcatttgaattgccgccggagcgggtaagcccgacgcta
aaaggtttatcaacgcggatcaaggaaacggaccgactaattccggataccgattatagg
atgatatctccccaaaaggagcttgtagcgatcggcagctttgacccgcatgaaaatgtc
attcggccgaagttggtattagggggcgataatcgcagttaa
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