Leptolyngbya sp. 7M: JVX88_04255
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Entry
JVX88_04255 CDS
T09998
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lept
Leptolyngbya sp. 7M
Pathway
lept03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JVX88_04255 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lept03019
]
JVX88_04255 (pnp)
03016 Transfer RNA biogenesis [BR:
lept03016
]
JVX88_04255 (pnp)
Enzymes [BR:
lept01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JVX88_04255 (pnp)
Messenger RNA biogenesis [BR:
lept03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JVX88_04255 (pnp)
Transfer RNA biogenesis [BR:
lept03016
]
Prokaryotic type
tRNA degradation factors
JVX88_04255 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_NusA_2nd
aRib
S1_RRP5
S1_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QYO66021
LinkDB
All DBs
Position
complement(900954..903080)
Genome browser
AA seq
708 aa
AA seq
DB search
MTKKYLKESIKLGGEELIVETGKVAKQADGSVIIRYGDTMLLVTAVSMKSAKEGLDFFPL
TVEYRESSYSAGRIPGNYFRREGRPSEKEILTCRLIDRPVRPLFPDGYSFETQIVGTVIS
ADSENDPDVIAITGASCALYLSDIPFDNPIAGVRIGLIDGKYVVNPTYDERRVSDLNLVV
AGTEEAIVMVEAEANEVPEKIMLEALLLAHKEIKRLCLWQKELGKALAITKREFVPQPID
ESLIAEVEANFGSRLREALDTTGKDKLTSYAAVDALKKEVVESYPEEEIEKRHMAGKAFS
HLKEKIFREDMLGNRRRPDGRKFSEIRPISCEVGWLPRVHGSALFTRGETQAIVTTTLGT
KMDEQYLDDIEKGEVKRRFMLHYNFPPYSVGEAGRFGGTSRRETGHGNLARRAIEAVLPT
EEEFPYTMRVVSDITESNGSSSMASVCGGILSLMDAGVPIKRPVAGVAMGLVMEGNRYAI
LSDIAGAEDHYGDMDFKVTGSSEGITALQMDIKVAGINAMILQEALEQARKGRMHILGIM
EKAIAEPRKDISKYAPRIITLKIHPDKIRDVIGKGGSVIRALTEETGAKIDIEDDGTVLI
ATADGAAAEEAIARIKAITAEAEIGQTYLGTVSRIVDFGAFVEIMPGLDGLLHISEISDR
RVKDVRDELKEGQQIMVKCIGKEGNKIKLSRKAILAEEKAKASGSGEE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaatacttgaaagaatcgatcaagctcggtggagaagagttgatcgtagaa
accggcaaagttgccaaacaggccgatggttcggtcattatccgttacggagatacaatg
ctcttggtaacggcagttagtatgaagtcggcaaaggaaggattggatttctttccgttg
actgttgaatatcgtgaatccagctattcggccggacggatccccggaaattattttcga
agagaaggccgcccgagcgagaaagagatactgacgtgtcgattgatcgatcggccggtt
cgtccgctttttcctgatggttatagttttgagactcagatcgttgggacggtaatttct
gcagattcggaaaacgatccggacgtgatcgcgatcacaggagcatcatgtgctctctat
ctctcagatattccgttcgacaatcctatcgcgggtgttcgcattgggcttattgacgga
aaatacgttgtaaatccgacatacgatgagcgtcgagtttcggatctaaatctagtggtt
gcgggtacggaagaggcaatagtgatggtcgaggccgaagctaatgaagttcccgaaaag
ataatgcttgaagctcttttgcttgcccataaggagataaagcgtctttgtctatggcag
aaagaactcggaaaagctcttgctataaccaaacgagagtttgttccgcagccgatcgat
gaatctctgattgccgaagtagaagcgaattttggatctcggcttcgcgaagcccttgat
acgacaggtaaagataaattgacgagctatgctgcggttgatgccttgaaaaaagaagtt
gttgaaagttatccggaagaggagatcgagaagcgccacatggccggcaaagcattctca
catctgaaagaaaagatctttcgtgaggatatgctcggaaaccgcaggcgtcctgatggc
cgcaagttctctgagataaggccgatttcctgtgaggtaggttggcttccgcgtgttcac
ggttcggctctttttacccgtggggagactcaggcgatcgttaccacgacgctcggcact
aagatggacgagcagtatctggacgacattgagaaaggcgaggtaaagcggcgctttatg
ctccattataactttccgccatattccgtgggtgaagcaggacgatttggcggcacctcg
cgtcgagagaccggacacggcaatcttgcccgccgggcgatcgaagctgtgttgcctacc
gaggaagaatttccatacacgatgcgtgttgtttcggacataaccgaatcaaatggctcg
tcgtcaatggcatcggtttgtggtggaattctcagcctgatggacgcgggggtgccgatc
aagcggccggttgctggtgtggcaatggggcttgttatggagggaaatcggtatgcgata
ctttccgacattgccggtgccgaagatcactatggcgatatggattttaaggttaccgga
tccagcgaaggtataacggcattgcagatggacatcaaagtcgcaggtattaacgcgatg
atactccaggaagcgcttgaacaagcacgcaaaggccgaatgcatattttagggattatg
gaaaaagcgatcgctgagccacgaaaagatatctcaaaatacgctccgcggatcatcacg
ttgaaaatccatcccgacaagatccgtgacgttattggtaaaggcggctcggtcatccga
gctcttacggaagagaccggtgcgaagatcgatatcgaagatgacggtacggttctgatc
gcgaccgcggatggtgctgcagctgaggaagcgattgcccgcatcaaggcaataaccgca
gaagcggagatcggccaaacctatcttggtactgtctctcgtatcgttgatttcggggcg
ttcgttgagataatgccgggccttgacgggcttctgcacatatcggagatatctgaccga
cgcgtgaaggacgtccgcgatgagctcaaggaaggccaacagataatggtcaagtgcatt
ggcaaagaaggcaacaagatcaaactttcccgcaaagcgatcctggctgaggagaaagcc
aaggcttcgggcagtggcgaagaatag
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