Leptolyngbya sp. 7M: JVX88_04280
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Entry
JVX88_04280 CDS
T09998
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lept
Leptolyngbya sp. 7M
Pathway
lept03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JVX88_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lept03021
]
JVX88_04280
03400 DNA repair and recombination proteins [BR:
lept03400
]
JVX88_04280
Enzymes [BR:
lept01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JVX88_04280
Transcription machinery [BR:
lept03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JVX88_04280
DNA repair and recombination proteins [BR:
lept03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JVX88_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QYO66025
LinkDB
All DBs
Position
complement(906334..907317)
Genome browser
AA seq
327 aa
AA seq
DB search
MPSRLNVESDTLTPRYGKFYAQPFERGFGTTIGNSIRRALLSSIEGAAVTAVKIEGVEHE
FSPIKGVVEDATDVILNLKQVPFRMNGSGPKTLSISKKGPGEVTSADIEADGDVEILDTD
VHIATINGSGKLEIEMRLKRGRGYVSAEFNNDDDLSVGYIPVDSVHSPIKKVNYSVDKTR
QGSNTEFDKLTIEVWTDGSVKPEDSIGLAAKLVKDHMSIFINFEEEEEEYKYEDIARPPL
MRNDLLDKPVDELELSVRSYNCLKNADIRSIRDLIKRSEKEMLGTKNFGKKSLTEIKDML
HGMGLDFGMDFDEHGNPIPGSGGRDLD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctagccggctaaacgtcgaatcagataccttaacgccgcgctatggaaaattctat
gctcagccatttgagcgcgggtttggtacaaccatcggcaattccatacgccgagcactt
ctttcttcgatcgaaggagccgccgttactgccgtaaagatcgaaggcgttgaacacgaa
ttttcgccgatcaaaggtgtagttgaagatgcaaccgacgttattttgaatttgaaacaa
gttccgtttcggatgaatggctcgggaccgaagacgttgtctatcagcaagaaggggccg
ggtgaagttaccagcgcggatatcgaggcggacggagatgttgagatccttgacactgat
gttcatatcgcgaccataaatggatcgggtaaattggagatcgaaatgcgtctaaagcgc
ggccgcggttatgtctccgccgagtttaataacgacgacgatctttcggtaggatacatt
ccggtcgattctgtgcattcacctatcaagaaagtgaattattcggtcgataagacccgc
cagggttctaacactgaattcgataagctcaccatcgaggtttggacggacggttcggta
aagcctgaagactcgatagggcttgcggcaaaattggtcaaagaccatatgtcgatcttc
atcaattttgaggaagaggaagaagagtataaatacgaagacatcgcgcgtccgccgctc
atgaggaacgatcttcttgataagccggtagatgagctggaactttcggtccgttcctat
aattgcttaaagaacgccgatattcgctcgatccgggatcttatcaaacgaagcgaaaaa
gaaatgctcggtacaaagaatttcggaaagaaatcgttgaccgagataaaggacatgctt
cacggtatggggcttgattttggaatggattttgacgaacacggtaacccgatacccgga
tccgggggaagagacctggattag
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