Leptolyngbya sp. 7M: JVX88_04395
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Entry
JVX88_04395 CDS
T09998
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
lept
Leptolyngbya sp. 7M
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lept03019
]
JVX88_04395
03009 Ribosome biogenesis [BR:
lept03009
]
JVX88_04395
Messenger RNA biogenesis [BR:
lept03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JVX88_04395
Ribosome biogenesis [BR:
lept03009
]
Prokaryotic type
rRNA processing factors
JVX88_04395
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QYO66047
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Position
complement(929872..932412)
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AA seq
846 aa
AA seq
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MSKEMIISVNGREKKIAILDNGKVTEFYIERGEENSGIAGNIYKGRVQRVLPGMQSAFVS
IGLERDAFLYVSDFFDEEEEIERIVMERSKKGSKEDAKREANEKIERARIEREKQMESAQ
EISEPLAELAEPIDEPMPRESKETGKKRSRRGRDRKNTEEEQELTAGETFIEFDDSGFER
IVDDEDTGELFKDAYMQEAIVDQVRAVEFDMESIDEAEVGSLLTEVSSEGAAFERIADDE
DETEPEKPKKRTTKKAGAATEKRSRTKKKVKPDDETGSDGDAVEAPKKKPTRKKAATTRS
KTTKKKDSEDIVAGGSEILPDAEAEVREAPDTSAMSARRGGRGRRRSKAKKDENGNSGEH
LLGFDDVIKELEESDKHKDETALNSSVSAEEQDGQQEVTDERSSGESNGRKGSGRNKNRG
RERDRNENRNGRGDKRERMPTPTISDLLREGQEILVQIAKEPIAKKGARITSHIALPGRF
LVYMPTIEHLGVSRKIESSNERGRLRSLIQRIRAEEDIPSGGFIVRTAGIGISEEDLRQD
ARYLVRTWQDIKKTSEKAKSPALVHQDLDLVQRLLRDQLSDDFTAIRVDSEEEYLRTVEF
INRIQPRMVNRVKFYTREQPILDAYGVQEEIDKALKPRVWLRSGGYLVINQTEALVAIDV
NTGKFVGKGNARLEDTITKTNMEAVEEIARQIRLRDLGGIIVLDLIDMEDRRNRHKVSQA
LQEALASDRSPTKVLSFNDFGLIIMTRKRVKQSLERTMCAPCEYCEGAGWVKSPQTVCYE
ILAESRRLSKELEDVRQTTLRVHPDVAAALRSTERTVLEEIEAYLENVDLTADPHIHQAQ
FDFAFV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaaatgatcatcagcgtcaatggacgcgaaaagaagatcgccattcttgat
aacggaaaggtgaccgagttctatatcgaacgcggcgaagagaattcaggcattgccggc
aatatttacaagggaagggtacagcgcgttttacccggcatgcaatccgcatttgtatct
attggcttggaacgcgatgcattcctttatgtctccgatttcttcgatgaagaagaagag
atcgaacgtatcgtaatggaacgatccaagaaaggctcaaaggaagatgcaaaacgcgag
gcaaatgagaagatcgaacgggcacggatcgaacgtgagaagcaaatggaatctgcccag
gaaatttccgaaccgcttgccgagcttgctgagccgatagatgagcccatgccgagggaa
tctaaggagacaggaaagaaacggtcgaggcggggtcgagatcggaagaacactgaggaa
gaacaagagctgaccgcaggtgaaacctttatcgagtttgacgattctggtttcgaacgc
attgtggacgatgaagataccggcgaacttttcaaggacgcctatatgcaagaggcgatc
gtggatcaggtaagggcagtcgaatttgatatggagagcatcgatgaagccgaggtaggc
tctctacttactgaagtttcttcagaaggcgctgcatttgagcgtatcgccgacgatgag
gacgagacagagcctgaaaaaccaaagaaacgcaccacaaagaaagccggtgcggccacc
gaaaaaagatcgcgaacaaagaaaaaggtcaagccggacgatgagactggatcagatggc
gatgcagtagaagccccgaagaaaaaaccaactcgcaaaaaagcggcaaccaccagatca
aaaacaacaaagaagaaagacagtgaagatatagttgctggagggtctgagatcttgccg
gatgccgaggcagaagttagagaagctccggatacctccgcaatgtccgccagaagaggc
ggccgcggacgcagacgaagtaaagctaaaaaggatgagaacggaaattcgggagaacat
cttctcggatttgatgatgtgatcaaagaattagaagaaagtgataaacacaaagatgaa
acggcactcaattcatcagtatccgctgaagaacaagatggtcagcaagaggtcaccgac
gagcgatcaagcggcgaaagcaacggaaggaaaggttctggacgtaacaagaatcgggga
cgcgagcgtgatcgaaatgagaatcgtaatggccgcggagacaaacgtgaaaggatgcca
accccgaccatttcggatctgcttcgtgaaggacaagagatacttgtccagatcgcaaaa
gaaccgattgctaaaaagggcgcacgtattacttcccatattgcattgcccggacgcttc
ctcgtttacatgccgacgatcgaacatctcggcgtttcgcgaaagatagagtcttcgaat
gaacgcggcagactaaggtcgcttattcaaaggatccgggccgaagaagacattccgtcc
gggggattcatcgtccgaacagccggtattggtatatcggaagaggatctgcgacaggac
gcacgctacctggtccgaacctggcaggacatcaagaaaacatcagagaaagcgaaatcg
ccggcgctcgttcatcaagaccttgacttggtacaaagactgcttcgcgaccagctttct
gacgattttaccgcgatccgcgttgacagtgaggaagagtatctccgaacggtcgaattc
ataaataggatccagccgcgcatggtaaaccgcgtcaagttttacacacgcgaacaaccg
atcctcgacgcatacggtgttcaggaggagatcgacaaggccctgaagccgcgtgtttgg
ctgagatccggcggatatcttgttatcaatcagaccgaagctctggtagccatcgacgtt
aatacgggcaagttcgttggcaagggaaatgccaggcttgaggacaccattactaagacc
aacatggaagcggtcgaagagatcgcacgccagatacgcctgcgagacctcggtgggata
atcgtgctcgatctgatcgatatggaagaccgccgaaaccgccataaggtgtctcaggct
cttcaagaggctcttgcatcggaccgatcgccaacgaaggtgctgtcgttcaacgatttc
gggctcataataatgacccgcaaacgtgtaaagcaatcgctcgaacggacaatgtgcgcg
ccttgcgaatactgcgaaggcgccggatgggtaaaatcgccgcaaactgtttgctatgag
atacttgcagagtccagaagattgtcaaaagagcttgaagatgtccgtcagactacgctg
cgtgttcatccggatgttgccgcagctcttagatcaacagaacggacggttctcgaggag
atcgaagcttatctggaaaatgtggacttgactgctgatccgcatatccaccaggcacag
ttcgattttgcttttgtttga
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