Leptolyngbya sp. 7M: JVX88_05240
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Entry
JVX88_05240 CDS
T09998
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
lept
Leptolyngbya sp. 7M
Pathway
lept02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JVX88_05240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lept02022
]
JVX88_05240
02035 Bacterial motility proteins [BR:
lept02035
]
JVX88_05240
Two-component system [BR:
lept02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
JVX88_05240
Bacterial motility proteins [BR:
lept02035
]
Pilus system
Twitching motility proteins
JVX88_05240
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_8
AAA
Mg_chelatase
bpMoxR
AAA_2
AAA_16
AAA_22
MCM
AAA_7
AAA_19
AAA_3
nSTAND3
STAS
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
QYO66207
LinkDB
All DBs
Position
complement(1100819..1102213)
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AA seq
464 aa
AA seq
DB search
MSNILIVDDEQSYRQLLSLVFEGDGHIIRTAANGREAVDVIKKEPAHVIISDVKMPDMDG
IELLRQVRELYPDVGVILVTAHASVETAREAFKLGADDFIEKPFDVEELKLIVKKTLEKQ
ALIDENRAFRRAQRERGSVKNIIGNSAKMQAIFQMIETVAEVQSTVLITGESGTGKELVA
RAIHDLSPRAEKPFISINCGAFTETLLESELFGYVKGSFTGANTNRKGLFEAANKGTIFL
DEIGEMSAAMQVKLLRVLQERRIRPVGAHDEIPIDARVIAATNRDLKQMSIDGLFREDLF
YRISVIPITLPPLRERREDIADLVAHFIRKFCDQTGRQLSISPRSMQLLENYMWGGNVRE
LEHTIERAVALERGDEIQPERFPEHITNYNPERINAEFELPDTGINLSAHLDNLEKTYVI
EALRKTSGNQTKAADLLQMQVRSLRHLLDKHSIRSLSAQMRNGE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacatacttatcgttgacgacgagcaaagttataggcagttactaagtcttgta
ttcgaaggcgacggccatattatccgaactgccgctaacggacgtgaagcggtggacgtc
attaaaaaagaacccgcacacgtaatcatctccgatgtaaaaatgccggatatggacggc
atcgagctgcttcgtcaggtgcgcgaactataccctgatgttggtgttattcttgtaacc
gcccacgcttccgttgaaacagcccgcgaagctttcaaacttggtgccgacgattttatt
gagaaaccgttcgacgttgaggaattgaaactcatcgttaagaaaacccttgagaaacag
gcgttgatcgatgagaatcgggcgttcagacgcgctcagcgtgaacgtggaagtgtcaag
aatataatcggcaattctgcaaaaatgcaggcgatctttcagatgatcgagacggttgcc
gaagtgcaatcgacagtcttgataaccggcgaaagcggtacgggtaaagaattggtcgca
cgcgccatacatgacctaagcccgcgtgctgagaagccctttatttcgatcaattgcggg
gcttttacagaaacgcttctcgaatcagagctttttggatacgtaaaaggttcgtttact
ggggcgaacactaaccgcaagggtctatttgaagctgcaaataaaggtactattttcctt
gacgaaataggcgaaatgtcggccgccatgcaggtaaagctacttcgcgtgctgcaggaa
agaagaatacgtcctgtcggtgctcatgatgagatacctatcgacgcgcgggtgatagcc
gcaacgaatcgcgaccttaagcaaatgtcgatcgatggtcttttccgtgaggacctcttc
tatcgaatctctgtgattccgataaccttaccgcctttgcgcgaacgtcgcgaggacatt
gctgatcttgtcgcacatttcatccggaagttctgtgatcagacaggacgccagctttcc
atttcgccacgctcaatgcagttgcttgaaaactatatgtggggcggaaacgtgcgcgaa
ttagaacataccatcgaacgtgctgtagccttagaacgcggcgatgagatacagccggaa
cgattcccggagcacataacgaattacaaccccgaacgcatcaacgctgaatttgagctt
cctgacaccgggatcaatctctctgcacatttagataaccttgaaaaaacctacgtcatt
gaggcattaagaaaaacgtcaggcaatcaaacaaaagcggcagacctccttcaaatgcag
gttagatcgcttcgccatttactcgataagcacagtatccgaagcctctctgcccaaatg
agaaatggcgaataa
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