Leptolyngbya sp. 7M: JVX88_05615
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Entry
JVX88_05615 CDS
T09998
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lept
Leptolyngbya sp. 7M
Pathway
lept03030
DNA replication
lept03430
Mismatch repair
lept03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JVX88_05615 (holA)
03430 Mismatch repair
JVX88_05615 (holA)
03440 Homologous recombination
JVX88_05615 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lept03032
]
JVX88_05615 (holA)
03400 DNA repair and recombination proteins [BR:
lept03400
]
JVX88_05615 (holA)
Enzymes [BR:
lept01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JVX88_05615 (holA)
DNA replication proteins [BR:
lept03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JVX88_05615 (holA)
DNA repair and recombination proteins [BR:
lept03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JVX88_05615 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
DNA_pol3_delt_C
DUF6013
Motif
Other DBs
NCBI-ProteinID:
QYO66277
LinkDB
All DBs
Position
1175267..1176313
Genome browser
AA seq
348 aa
AA seq
DB search
MPKISIDTLRQQLRANDIKPVYVLYGPEGHLRNIVANTIADRCFGEGDLRDFNDSTFSLE
DPENIRDALASADQLPMMAARRAVRVVNVRVSSTAANDTLKEQHEQLVAGYLENPNPTSV
LIFVGEELNGNRKLAKLLEKHAVVVEFKPLEGKELFARLAKMFQEEGVTAEPEAIRYLIS
MTDPDLVKLSTEIKKLAAASMPEGKISVELVEQFISRTREVDNFSLTGHLIGRRPKQAAI
ALAQMLNDGAEPLMLLGLLGSNYRRLIIAKEMMDQGRDRREVANSVRLRYSDQEAFFAAA
RRTPMQDLLYAVGRIADVDLAIKNSLGGGTYGARMQMEMLVCDLASLN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagatctcgatagatacattaaggcagcaattgcgggcaaatgacattaaaccc
gtttacgtgctttatggtcctgagggacacctccggaatattgttgctaacactattgcc
gatcgatgcttcggtgaaggcgacctgcgcgattttaacgactcgaccttcagcttagaa
gaccctgagaacattcgggatgccttagcttcggcagatcagctcccgatgatggctgcc
agacgtgcggtccgagtagtgaatgttcgtgtttcctctactgcggccaacgatacgctg
aaagaacagcatgaacaattggttgccggctatcttgagaatccgaatccgacatcagtg
cttatttttgtcggagaagaattgaacggaaatcggaagctagccaagcttcttgaaaaa
catgctgttgtggtcgagttcaagccgctggaaggaaaggaactttttgcacgtcttgcc
aagatgttccaggaagaaggtgtgacggcggaaccggaggcgatacgctatttgatctcg
atgaccgatcctgaccttgtaaagctttcgaccgagatcaagaagctcgccgcggcctcg
atgccggaaggcaagatctcagttgaactcgtcgagcaatttatctctcgaacacgcgaa
gttgataacttttcgctgacgggacatctgataggccgacgccctaagcaggcggcgatc
gctttggctcagatgcttaacgacggtgcagaaccgcttatgctgctcggcctgctcggt
tcaaattatcgccggctgatcattgcgaaagaaatgatggatcaggggcgtgaccgtcgt
gaggttgcgaactcagtcaggctaaggtacagcgaccaggaagcatttttcgccgcggca
cggcggacacccatgcaggatctattgtatgctgttggacggattgcggatgttgatctt
gctatcaagaattcacttggcggtggcacgtacggagctcgaatgcaaatggagatgctg
gtttgtgatctcgcctcgctaaattga
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