Leptolyngbya sp. 7M: JVX88_06435
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Entry
JVX88_06435 CDS
T09998
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
lept
Leptolyngbya sp. 7M
Pathway
lept00541
Biosynthesis of various nucleotide sugars
lept01100
Metabolic pathways
lept01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JVX88_06435 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lept01005
]
JVX88_06435 (rfaD)
Enzymes [BR:
lept01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
JVX88_06435 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
lept01005
]
Core region
JVX88_06435 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Sacchrp_dh_NADP
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QYO66434
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Position
complement(1365708..1366682)
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AA seq
324 aa
AA seq
DB search
MSIIVTGGAGFIGSAVVWRLNELGHDDILIVDRMDETDKWKNFVPLKFKDYIDADDFIDY
IEAFRDAEAIIHMGACSSTTEKDARYMLINNFGYTKDLADFSVEKGIRFIYASSAATYGD
GSAGMEDGHEELHKLRPLNIYGYSKHLFDQYAARHGMFEKIVGLKYFNVFGPNEGHKGDM
RSLVNKAFSQINETGSLKLFKSANPAFEDGEFGRDFVYVKDAVDMTLHFMGNKIGGLFNV
GSGQMKTWNALADAIFDALDRPKNVEFIDMPEHLRDRYQYQTQADLSSIRRAGYAAETTP
LNTAIKDYVQNYLLKGRYLGDEDL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcattgttacaggtggggccgggtttataggaagtgctgttgtttggcggctg
aatgagctaggtcacgacgacatattgatcgttgaccgaatggacgagaccgacaagtgg
aagaattttgtgccgctaaaatttaaagattatattgatgcggatgacttcatagactac
atcgaagccttccgcgacgccgaggcgatcattcacatgggggcgtgttcatcgaccacg
gagaaggacgcccgatacatgttgattaacaactttggatatacaaaggacctggcagat
ttttccgtcgagaaaggaatcaggttcatttacgcatcttcagcagcgacatacggtgac
gggtcggcggggatggaggacggccacgaagagttgcacaagctgcgtccgctgaacatt
tacggctactcgaaacatctctttgatcaatatgcggcccgacacggaatgtttgaaaag
atcgtcgggctgaaatacttcaacgtctttggcccgaacgaagggcacaagggcgatatg
cgttcactagtgaacaaagcattcagccaaataaatgagacggggagcttgaagctgttc
aagagcgcgaaccctgcctttgaggatggcgaatttggtcgcgatttcgtttatgtgaaa
gatgcggtcgatatgacgctgcattttatgggaaacaagatcggcgggctgttcaatgtc
ggttcggggcaaatgaagacctggaatgctcttgctgatgcgatctttgatgctcttgac
cgtccaaagaatgttgagttcatcgatatgcccgaacatctccgcgatcgttatcaatac
cagactcaggccgatctttccagcattcgccgtgccggctatgctgccgaaactacacca
ctcaatacggccattaaggactacgtacagaattacctcttgaaaggcagatatcttggt
gacgaagatctatga
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