Leptolyngbya sp. 7M: JVX88_06495
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Entry
JVX88_06495 CDS
T09998
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lept
Leptolyngbya sp. 7M
Pathway
lept03420
Nucleotide excision repair
lept03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JVX88_06495
03430 Mismatch repair
JVX88_06495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lept03400
]
JVX88_06495
Enzymes [BR:
lept01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JVX88_06495
DNA repair and recombination proteins [BR:
lept03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JVX88_06495
MMR (mismatch excision repair)
Other MMR factors
JVX88_06495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QYO66446
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Position
1377695..1379566
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AA seq
623 aa
AA seq
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MLRRVEALTGSQNVHRVWGGTFHRIANLILRRHAVSLGFNANYSILDSEDAKDFINVCID
DAAVDTRAKRFPKAEVLQDIISYATNTDLPIENVIAGKYPYFEMLTAQIKRVDAIYHARK
LERNVMDYDDLLLKLKQLLTEKREITELYTEQFQHILVDEYQDTNRLQAEIIDLLAAKHR
NVMVVGDDAQSIFAWRGAEFTNIYEFPKRYPEAELFKLETNYRSTPEILGLANTSIASNR
RQFPKMLKAVKRSRDVKPALVPCSDVDQQSAFVASRILELRDEGISLEDIAVLYRSHYHS
IELQLELSRRNIPYRVRSGVRFFEQAHIKDIVSYLRVLVNPRDELAWKRILKLLPGIGNI
TADRVFESIATRISGTEILPGSSQGQTGPLTTVTALKNATQVSKTGRKGLEDLGSLLEML
VSNEFRDQPSKQITYVFENGYEQYLLENFENADARSEDIRGLAQFSQRYETTEAFLSELA
LLATERFKEPQPLVGEEVVEGGDEDELLTLTSVHQAKGLEWKAVFIIWAAEGKFPSPRSL
KEIESEEEERRLWYVALTRAKDELYLTYPLLMTDYNRQTVLQKPSRFISECPPELFEIWD
LEEELPARDAMPSIKDLPTEYLN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctaagacgtgtggaggctttgaccggttcacagaacgttcatcgcgtgtggggcgga
acgtttcaccggatcgcaaatctgatattgcggcggcacgcagtctcacttgggttcaat
gctaactactcgatacttgacagcgaagacgcgaaggactttataaacgtatgcattgat
gatgccgcggtcgatacaagggcaaagcggtttccgaaggccgaagtattgcaggacatc
ataagctacgctacaaatactgacttgccaatagagaacgtcattgcaggaaagtatccg
tattttgagatgcttaccgcgcagatcaagcgcgtggatgcgatatatcacgccagaaaa
cttgagcggaacgtgatggactatgacgatctgttactgaagctcaagcagctcttgacc
gaaaagcgagagatcaccgagctttacaccgaacagtttcagcatatcctggtcgatgaa
tatcaggacacgaatcgtttgcaggcggagataatcgacctgcttgccgcaaagcatcga
aacgtaatggttgtcggcgatgacgctcaatcgatctttgcatggcgcggtgctgagttc
acgaacatctacgaatttccgaagcgctatcccgaagccgagcttttcaaactcgaaact
aattatcgttcaacaccagagatattagggcttgcgaacacttcgatcgcatcgaaccga
cggcaatttccaaagatgctgaaggcggtaaagcgttcgcgggacgtgaagcctgcgctc
gttccgtgttcagacgttgatcagcaatcggcctttgtcgcatcgcgtatattagagctg
cgcgatgaagggatctcgcttgaggacatcgccgttttatatcgatcacattatcattcg
atcgaattgcagctggaactttcccgacggaacattccatacagagttcgatccggcgtg
cgcttttttgagcaagctcacatcaaagacattgtgtcatatctgcgagtgttggtgaat
ccgcgcgatgaattagcttggaaacggatactaaagctattgcctggcattggaaacatt
acggcagatcgtgtttttgagtcgatagctacaagaatttccggaacagagatattgccc
ggaagttcacagggtcagaccgggcctctgactacagtaacggcgctaaagaatgccact
caggtgtcaaaaaccggtcgtaaggggcttgaagatctgggcagcttacttgagatgctt
gtatcgaacgaattccgcgatcaaccctcaaaacagataacttatgtcttcgagaacggt
tacgagcaatatctgctggaaaactttgagaatgccgatgccaggagcgaagatatacgg
gggctggcccagttctcacagcgttatgagacgacggaggcatttctttctgaactcgcc
cttcttgctacagaacgattcaaggagccgcagccgcttgtcggcgaagaagtggtcgaa
ggcggcgacgaagatgaacttttaacgcttacttcggtacatcaggcaaagggccttgag
tggaaggcggtctttatcatttgggctgcggagggcaagttcccaagcccgcgttcgctg
aaagagatcgaatctgaggaagaagaacgtcgtctctggtacgttgctctgacacgtgca
aaagatgaactatatctaacttatccgctgttgatgacggattataatcgccagaccgtc
ctgcaaaagccctcacgtttcatcagcgagtgcccgccagaattattcgagatctgggac
cttgaagaagaactccccgcgcgagacgcaatgccgagcatcaaggacctacctaccgaa
tatctaaattga
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