Leptolyngbya sp. 7M: JVX88_17075
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Entry
JVX88_17075 CDS
T09998
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
lept
Leptolyngbya sp. 7M
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lept03021
]
JVX88_17075
Transcription machinery [BR:
lept03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JVX88_17075
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Ortholog
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GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_10
DUF4143
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QYO68324
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Position
complement(3427973..3428929)
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AA seq
318 aa
AA seq
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MNTTSTSPDMVRAYLREIGRVPLLSHEQEILFGKQVQRLAALNELKEEFIAKVGREPDVE
EWSQQAKISVAELQQIVAEGEFAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRQLAQ
KLGRAATASELAAELDLTTKQVREYLERARQPLSLDLRVGDNQDTELGELLEDTGPSPED
FASQSALRGELEQLLADLTPQQREVLSLRFGLEDGQSLTLAKIGDRLNISRERVRQIERE
ALTKLRKRRADIREYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgacttcaacttcccctgatatggtgcgcgcttatctaagagaaatcggacga
gtgccgttactgagccatgagcaggaaattctctttggtaagcaggtgcagcgccttgca
gcccttaatgagcttaaggaagagttcattgccaaggttggacgggaaccagatgtagag
gaatggtctcaacaagccaagatttcggtagcagaattgcagcagattgtagctgaaggt
gaattcgctaagcgcaaaatggttgaagccaatttgcgtttggtagtttcggtggcgaaa
aagtatatcaagcgcaatgttgatctgttggatctgatccaggaaggcacgattggcatg
cagagaggcgtcgagaaatttgatccaaccaagggctatcggttttcgacctacgcctac
tggtggatccgacaagccattacccgtgccattgctgagaaaggacgcacgattcgtctg
ccgatccacatcaccgagaagttgaacaagattaagaaagcgcagcggcagttagcacaa
aagttaggacgggcggctacggcatctgagctggcagcagaattagatctaacaactaaa
caggtgcgggaatacctggagcgagcacgccaacctctgtccctggatctgcgagtagga
gataatcaagacaccgaattgggcgagctactggaagatacgggtccttcgccagaagac
tttgcttctcagtcagctcttagaggtgagttggagcagctcttagccgatctaactcct
cagcagcgggaagtgttgtcccttcggtttggactagaagacggtcagtcgttgaccctg
gccaaaattggcgatcggctcaatattagccgggagcgtgtacgccaaattgagcgggag
gcgttgactaaactgcgcaagcggcgggctgatattcgcgagtatctagcaagctga
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