Leptolyngbya sp. 7M: JVX88_17245
Help
Entry
JVX88_17245 CDS
T09998
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lept
Leptolyngbya sp. 7M
Pathway
lept00260
Glycine, serine and threonine metabolism
lept00460
Cyanoamino acid metabolism
lept00630
Glyoxylate and dicarboxylate metabolism
lept00670
One carbon pool by folate
lept00680
Methane metabolism
lept01100
Metabolic pathways
lept01110
Biosynthesis of secondary metabolites
lept01120
Microbial metabolism in diverse environments
lept01200
Carbon metabolism
lept01230
Biosynthesis of amino acids
lept01240
Biosynthesis of cofactors
lept04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JVX88_17245
09102 Energy metabolism
00680 Methane metabolism
JVX88_17245
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JVX88_17245
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JVX88_17245
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JVX88_17245
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JVX88_17245
Enzymes [BR:
lept01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JVX88_17245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QYO68353
LinkDB
All DBs
Position
3460450..3461745
Genome browser
AA seq
431 aa
AA seq
DB search
MPKSNFDCLTETDLVIAELIQCELQRQQNHLELIASENFTSPAVLAAQGSVLTNKYAEGL
PGKRYYGGCEFIDEIEQLAIDRAKQLFNAAYANVQPHSGSQANFAVFSALLKPGDTILSL
DLSHGGHLTHGSPVNLSGKLFRTIHYGVHPETEMLDYEQIRELAHQYSPQLIICGYTAYP
RQIDFQQFRAIADEVNAYLLADMSHIAGLVATGYHPSPIPDCDVVTTTTHKTLRGPRGGM
ILSRDPELGKQFDRAVFPGTQGGPLEHVIAGKAVALGEALQPAFKSYIQQVVANAQVLAA
QLQLQGIKIVSGGTDNHLLLIDLHPLKLTGKQADQLLGDINITVNKNTVPFDSQPPWITS
GIRLGSPALTTRGMGSVEFAEIGKIISARLLEPNDAAIVKHCRQRVAQLCEAFPLYPHLN
QKPLALISSAC
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatccaactttgattgcttgactgaaactgatctcgtgattgctgagttgatt
cagtgcgaactgcaacgacaacagaatcatctagaactcattgccagtgaaaatttcaca
tctccagcggtactggcagcccagggatcggtattgactaacaaatatgctgaaggactt
cctggtaaacgctattacggtggatgtgagtttattgatgagattgagcagttagccatc
gatcgggcaaaacaactctttaatgcggcatacgcaaacgttcagccccattcgggttca
caagcgaattttgccgttttctcagctttgttaaaaccaggagataccattctcagtctt
gatctatctcatggtggacatctcactcacggttcacccgtcaatctttcaggaaaactg
tttcgcactattcattatggtgttcatccggaaacggaaatgctggattatgagcagatt
cgtgagctggctcatcaatattctccgcaactgattatttgtgggtacacggcttatcct
cgccagattgactttcagcaatttcgggcgatcgctgatgaagtcaatgcttacttgctg
gctgatatgtcgcacattgctggattggttgcgacgggctatcaccccagtccaattccc
gattgcgatgtggtgacgacgaccacccataaaaccctgcgcggtcccagaggagggatg
attctcagtcgtgacccggagttaggtaaacagttcgatcgagccgtgtttccgggtact
caaggcggtccgttagagcatgtcattgccggaaaggcagttgccttgggcgaagccctc
caacccgctttcaagtcctacattcagcaggtcgttgcaaatgctcaagttctagccgct
caactccaactccagggcatcaaaattgtgagtggcggcactgacaatcatctgctactg
attgatctgcacccactcaaactgacagggaaacaagccgatcaactgctaggtgatatt
aatattactgtcaacaaaaacacggttccctttgattcccaacccccgtggattaccagt
ggaattcggctaggatcgcctgctctcacaactcgtggcatgggcagcgtcgagtttgca
gaaattgggaagattatcagtgctcgccttttggaaccaaatgatgcggcgatcgtgaaa
cactgccgtcagcgcgttgcccaactctgtgaagcttttccactctaccctcatctcaat
caaaaaccgttggcgttgatctcaagtgcttgctaa
DBGET
integrated database retrieval system