Leptolyngbya sp. 15MV: J4558_01110
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Entry
J4558_01110 CDS
T09999
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lepv
Leptolyngbya sp. 15MV
Brite
KEGG Orthology (KO) [BR:
lepv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lepv03016
]
J4558_01110 (rnd)
Enzymes [BR:
lepv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J4558_01110 (rnd)
Transfer RNA biogenesis [BR:
lepv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J4558_01110 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QYU68780
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All DBs
Position
complement(217790..218992)
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AA seq
400 aa
AA seq
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MKIHDLITTTAALKELCTRLAQSDFVCVDTEFMRENTYWPELCLVQIGNTEEAAAIDPMA
SGIDLAPLLELLCDNEDVLKVFHAGGQDVEIIYNLTGTTPHPIFDTQIAMMAVSQSEQIG
YANLVESWLGLTIDKGARFTDWGRRPLTERQIEYAIGDVTHLAKIFPKILKKLIKTGRGA
WLDAEMEKLADPDNYRTDPESAWKRIRQAGRNPQVLGRLKALAAWREQEAQHKDIPRGRI
MRDETLADLASHPPRQQGDLTKVRGLSNAWKDNDIGKRLMKVLDKAEPLTPEEMPPKEKR
GAPLGKEGALVADLLKLLLKIRSREIDVASRLLTRSDEMEALAAGVRDLPVLDGWRYEVF
GRDALELVEGKMGFAVKRGKLAMTLIEAAPAEMAEAQAAE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacacgacctgattaccaccaccgcggcgctcaaggagctctgcacccgcctc
gcccaatccgatttcgtgtgcgtcgacaccgaattcatgcgcgagaacacctattggccc
gaactgtgcctggtccagatcggcaataccgaggaagccgccgcgatcgacccgatggcc
agcggcatcgacctcgcgcccttgctcgaactgctgtgcgacaacgaggacgtcctcaag
gtctttcacgccggcgggcaggatgtcgagatcatctacaacctgaccggcaccaccccg
cacccgatcttcgacacccagatcgcgatgatggcggtcagccagtcggaacagatcggc
tatgccaacctggtcgaatcctggctcggcctgaccatcgacaagggcgcgcgcttcacc
gactggggccgccgcccgctgaccgagcggcagatcgaatatgccatcggcgacgtgacg
catctggccaagatcttccccaagatcctgaagaagctgatcaagaccgggcgcggcgcc
tggctcgacgccgagatggaaaagctcgccgatccggacaactaccgcaccgacccggaa
agcgcgtggaagcgcatccgccaggccgggcgcaatccgcaggtgctgggtcggctcaag
gcgctggccgcctggcgcgagcaggaagcccagcacaaggacatcccgcgcggacgcatc
atgcgcgacgagacgctggccgacctcgccagccaccctccgcgccagcagggcgacctg
accaaggtgcgcggcctgtccaacgcctggaaggacaacgacatcggcaagcggctgatg
aaggtgctggacaaggccgagccgctgacgcccgaggaaatgccgcccaaggaaaagcgc
ggcgcgccgctgggcaaggaaggcgcgctggtcgccgacctgctcaagctgctgctcaag
atccgcagccgcgagatcgatgtcgcctcgcgcctgctgacccgctccgacgagatggag
gcactggctgccggggtgcgcgacctgcctgtgctcgacggctggcgctacgaggtgttc
ggacgcgacgcgctcgaactggtcgaaggcaagatgggcttcgcggtcaagcgcgggaag
ctcgccatgaccctgatcgaggcggccccggccgagatggccgaggctcaggcggcggag
tga
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