Leptolyngbya sp. 15MV: J4558_01950
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Entry
J4558_01950 CDS
T09999
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lepv
Leptolyngbya sp. 15MV
Brite
KEGG Orthology (KO) [BR:
lepv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lepv03032
]
J4558_01950 (topA)
03400 DNA repair and recombination proteins [BR:
lepv03400
]
J4558_01950 (topA)
Enzymes [BR:
lepv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J4558_01950 (topA)
DNA replication proteins [BR:
lepv03032
]
Prokaryotic type
DNA Topoisomerases
J4558_01950 (topA)
DNA repair and recombination proteins [BR:
lepv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J4558_01950 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
tRNA-synt_His
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QYU68926
LinkDB
All DBs
Position
378683..380788
Genome browser
AA seq
701 aa
AA seq
DB search
MQLVIVESPAKAKTIEQYLGKDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWELYRDKQS
RFKEIADAAKKADRLVLATDPDREGEAISWHVRELLAKRKALPAKVDRVTFNAITRPAVT
EAMTRPRELDQPLIDAYLARRALDYLYGFTLSPVLWRRLPGAKSAGRVQSVALRLIVDRE
REIEAFRAEEYWSVVARLEHDGTEFDARLVRFEGQKLDKLTLGNEGSALAARAAVEAGRF
TVEEVETKPFARNPAPPFTTSTLQQEAARKLGFSASHTMRLAQSLYEAGAITYMRTDGVQ
MDGSAISACRKAVADRYAANFLPEKPRIYQSKAKNAQEAHEAIRPTDFTRDRAGSGDEGR
LYDLIFKRAMASQMAAASLERTSVTLRDATGQHELRATGQVVKFPGFLAVYQEGLDDRDD
DEDGLLPLLRKGDSPAKKGVAANQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQTL
RDRAYVRMEKNRFFAEESGRLLTAFLERFFERYVAFDFTAGMEDELDTVSDGREDWKELL
AAFWRDFKPKTEEVMERKPSEVTEALDEFLSDYLFPPGEDGTDPRRCPSCGTRHGFEYQS
WFGFTLYAEGARGALGRGGTYEIGGTEEPATGFSLYLDPLVETLEAPETRGALYLPLGHD
RAAAAKLRAEGWRTVAALGEGEDAAALGCSHRLNGEEAVRL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgtcatcgtagaatcgccggccaaggcgaagaccatcgagcaatacctgggc
aaggacttcaaggttctcgccagctacggccatgtccgcgacctgccgcccaaggatggc
agcgtccgcccggacgaggatttcgcgatggattgggaactctatcgcgacaagcagagc
cgcttcaaggaaatcgccgacgcggcgaagaaggccgaccggctcgtcctcgccaccgac
cccgatcgcgagggggaggctatctcgtggcacgtgcgcgagctgctggccaagcgcaag
gcgctgcccgccaaggtcgaccgcgtcaccttcaacgcgatcacccggcccgccgtgacc
gaggcgatgacccgcccgcgcgagctcgaccagccgctgatcgacgcctatctggcgcgc
cgcgcgctcgattatctctacggtttcaccctctcgccggttctgtggcggcgcctgccg
ggggccaagagcgcggggcgggtgcagtcggtcgcgctgcgcctgatcgtcgatcgggag
cgcgagatcgaggcgttccgggcggaggaatactggtcggtcgtcgcccggctggagcat
gacgggaccgagttcgacgcgcggctggtcaggttcgagggccagaagctcgacaagctg
acgctcggcaacgagggcagcgcgctggcggccagggccgcggtcgaggcggggcgcttc
acggtcgaggaggtcgagaccaagcccttcgcccgcaatcccgcgccgccgttcaccacg
tccacgttgcagcaggaggcggcgcgcaagctcggcttctccgccagccacaccatgcgg
ctggcgcaatcgctgtatgaggcgggcgcgatcacctatatgcggaccgacggcgtgcag
atggacggcagcgccatcagtgcctgccgcaaggcggtggccgaccgctacgccgccaat
ttcctccccgagaagccgcgcatctaccagagcaaggccaagaacgcgcaggaagcgcac
gaggcgatccggccgaccgatttcacccgcgaccgcgccggttcgggcgacgaaggcagg
ctctacgacctcatcttcaagcgcgcgatggcgagccagatggccgccgccagcctcgag
cgcaccagcgtgaccctgcgcgatgcgaccggccagcacgagctgcgcgcgaccggacag
gtggtgaaattccccggcttcctcgcggtttatcaggagggcctcgacgaccgggacgat
gacgaggacggcttgcttcccctgctgcgcaagggcgacagcccggccaagaagggcgtc
gcggcgaaccagcacttcacccagccgccgccgcggttttccgaggcgagcctggtcaag
cggctcgaggaattgggcatcggccgtccctccacctacgcatcgaccatccagacgctg
cgcgaccgtgcctatgtccggatggagaaaaaccgtttcttcgcagaggaatcgggccga
ctgttgacggcgtttctcgaacggttcttcgaacgctacgtcgcgttcgacttcaccgcc
gggatggaggacgaactcgacacggtttcggacgggcgcgaggactggaaggaactgctc
gccgcgttctggcgcgacttcaagcccaagaccgaggaggtgatggagcgcaagccgtcg
gaagtcaccgaggcgctcgacgaattcctctccgactacctgttcccgccgggcgaggat
ggcaccgatccgcgccgctgccccagttgcggcacgcgccacggcttcgaataccagagc
tggttcggcttcacgttgtatgccgagggcgcaagaggcgcgcttggccgcggcggcacc
tacgagatcggcggcaccgaggaaccagccaccggcttctcgctctacctcgacccactg
gtggaaacgctggaggcaccggaaacgcgcggcgcgctctacctccccctgggccacgac
cgcgcggcggcagcgaagctgcgcgcggagggctggcgcaccgtcgctgcgctgggcgag
ggcgaggatgcggcggcgctggggtgttcgcataggctgaatggtgaggaagctgtaagg
ctttag
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