Leptolyngbya sp. 15MV: J4558_06965
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Entry
J4558_06965 CDS
T09999
Name
(GenBank) Rnase Y domain-containing protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lepv
Leptolyngbya sp. 15MV
Pathway
lepv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lepv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4558_06965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lepv03019
]
J4558_06965
Messenger RNA biogenesis [BR:
lepv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J4558_06965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
KH_1
HD
HDOD
KH-I_KHDC4-BBP
dUTPase
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QYU69860
LinkDB
All DBs
Position
1385268..1386665
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AA seq
465 aa
AA seq
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MFISLGVAPSILSVVGMPLALAEVSTAVAVAIGILALLVGGGLALLAVRAVMGQSLARAR
SEATRIIEAAQAEARTNAEKMVVEAERAALDRKTRADAEVDAIRNELKETERRLAKREDV
LERKEEAAAEREKSLSRQAEALRSREAAVEKQQVELELLVERQKTELLRIADMTREQARQ
AVLAKLEDEVRLDAAKLTRKITEEAEAHAKERAREITLMAIQRYSTEHTSEATVRAVEIP
SDDMKGRIIGREGRNIRAIERATGADIIVDDTPGVIVVSCFDKVRQAVAVESLERLIKDG
RLHPARIEEMVEKVKSEMEERIQKYGKDAVLEVNLRGVHPKIVEAMGKLYFRTSYGQNVL
RHSIEVAYLCQIIAEQLGLDGAIARRCGFLHDIGKAMDHEMGFWSELPIGAPVEDPWKGD
LDRVGGLRRGHRRRLRGMHPHSVPSQRRGIVHRLGLCRGRSGMAG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttcatctcgctgggggtggcgccgtcgatcctttcggtcgtcggcatgccgttggcg
ctcgcggaggtctccaccgcggtcgcggtcgcgatcgggattcttgcgctcctcgttggt
ggcggtctggccctgctggcggttcgtgcggttatgggtcagtcattggcccgtgcccgc
agcgaagcaacacgcatcatcgaggcggcccaggcagaggcacgtacgaatgccgaaaag
atggtcgtcgaggctgagcgggcggctctcgatcgcaagacaagagccgatgcggaagtc
gacgcgatccgcaacgagttgaaggagacggagcggcgtctggccaagcgtgaggacgtg
ctggagcggaaggaggaggccgctgccgagcgtgagaagtcgctctcacgccaggccgag
gcgttgcggtcgcgtgaggccgcggtggagaagcagcaggtcgagctcgagttgctggtg
gagcgtcagaagaccgagttgctgcggatcgccgacatgacccgcgagcaggcgcgtcag
gcggtgctggccaagctcgaggatgaggtgcggctcgacgcggcgaagctgacgcgcaag
atcaccgaagaggccgaggcccacgccaaggagcgtgcccgcgagatcacgctgatggcg
atccagcggtactccaccgagcacacgagcgaggcgaccgtcagagcggtcgagatcccc
tcggacgacatgaaagggcggatcatcggccgcgaaggccggaacatccgtgccatcgag
cgggccaccggcgccgacatcatcgtcgatgacacgccgggcgtgatcgtcgtctcgtgc
ttcgacaaggtgcggcaggccgtcgccgtcgaatcgctcgaacgcctgatcaaggatggc
aggctgcacccggctcgcatcgaggagatggtcgagaaggtcaagagcgagatggaggaa
cgcatccagaagtacggcaaggacgccgtgctggaggtcaacctccgcggcgtgcacccc
aagatcgtcgaggcgatgggcaagctctacttccgcaccagctacgggcagaacgtgctt
cggcactcgatcgaggtcgcctacctctgccagatcatcgccgagcagttgggacttgac
ggtgccatcgcccggcgctgcggcttcctccacgacatcggtaaggcgatggaccacgag
atgggcttctggtcagaattaccgatcggtgcgcccgtggaggacccgtggaagggtgat
ctcgaccgtgtcggtgggttgcgccgcgggcataggcggcgtctgcgtggcatgcaccca
cattccgtcccttcccagcgccggggcattgtgcaccgcttggggctgtgccgtggtcgt
tcggggatggccggatga
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