Leptolyngbya sp. 15MV: J4558_15975
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Entry
J4558_15975 CDS
T09999
Symbol
pstB
Name
(GenBank) phosphate ABC transporter ATP-binding protein PstB
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lepv
Leptolyngbya sp. 15MV
Pathway
lepv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lepv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4558_15975 (pstB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lepv03400
]
J4558_15975 (pstB)
Enzymes [BR:
lepv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4558_15975 (pstB)
DNA repair and recombination proteins [BR:
lepv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
J4558_15975 (pstB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
DEAD
Helicase_C
CarD_TRCF_RID
AAA_21
ResIII
AAA_25
AAA_16
SMC_N
AAA_22
AAA_29
AAA_30
Cas3-like_C_2
nSTAND1
RsgA_GTPase
ABC_ATPase
AAA_18
RecG_dom3_C
NACHT
AAA_23
AAA
AAA_28
NB-ARC
AAA_33
Rad17
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QYU66471
LinkDB
All DBs
Position
complement(3064278..3066815)
Genome browser
AA seq
845 aa
AA seq
DB search
MPYHELLHRYHTRRRAVRLRAARAMDTFLDIAPGDYVVHAEHGIARFLGLGAIKAPRRRA
PAEGEQVPAPLREARRTQEPEEYLTLEFAGGSKLHVPALQIDQVQRYVGGFKGKPQLSTL
GGQRWKAQKQRVADSVRDLAAEMLRVRAAREHMPGIRYPGDTAWMREFEAEFPYEETEDQ
LAAIAEIKRDMESPRPMDRLICGDVGFGKTELAIRAAFKAAEFGKQVAVLVPTTVLAEQH
ERTLRSRLSGYPFRIESLSRFKSDAQQRQIIRDAAKGQIDILVGTHRILSDDVRFADLGL
VVIDEEQRFGVEHKERLLRLRLTVDVLTLSATPIPRTLHMSMLGLRDISSLTTAPLDRRA
IVTEVIPFNERRVQQAIARELAREGQVYVVHNRISDIFSFADSIQKLAPGARVVVGHGQM
DPHTLEDVMLRFMRRDADILVSTTIIESGIDIPTANTIIINDADRFGLADLHQLRGRVGR
SKHRAYCYLMLPNDRPLKETARKRLKAIEQYSMLGAGFKIAMRDLEIRGAGNLLGAEQSG
HIAAVGYEMYCRLLDQTVRELKGERPHPTISATGIDIGITSRPHTPAIHPAIAAEDPVLN
VRDFSLYYGGSKALHHISMDVPRGKVTALIGPSGCGKSTLLRAVNRMNDLIAGVRVTGQM
VLNGQPIYSPDVDVIDLRKRMGMVFQKPNPFPMSVFDNVIYPLRIDGENRRSTLEEACER
SLRAAALWDEVKDRLRDSALGLSGGQQQRLCIARAIVADPEVLLMDEPCSALDPIATLRI
EELIHQVSQRYTVLIVTHNMQQAARVSDYTAFLYLGRLVEFGPTAEVFQRPHLPETEQYV
TGRFG
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
gtgccctaccacgagctgctccaccgctaccacacccgccgccgcgccgtgcgcctccgc
gccgcccgcgccatggacacgttcctcgacatcgccccgggcgactacgtcgtccacgcc
gagcacggcatcgcgcgattcctgggcctgggcgccatcaaggccccacgccgccgcgcc
ccggccgagggcgagcaggtccccgcgccgctccgcgaggcgcgccgaacgcaggaaccc
gaggagtacctcaccctcgaattcgcgggcggctccaagctccacgtcccggccctgcag
atcgaccaggtccagcgatacgtcggcgggttcaagggcaagccccagctctcaaccctg
ggcgggcagcgatggaaggcccagaagcagcgcgtcgccgacagcgtcagggacctcgcc
gccgagatgctccgcgtccgcgccgcccgcgagcacatgcccggcatccgctacccgggc
gacaccgcatggatgcgcgagttcgaggccgagttcccctacgaggaaaccgaggaccag
ctcgccgcgatcgccgagatcaagagggacatggagagcccaaggcccatggaccgcctc
atctgcggcgacgtgggcttcggcaagaccgagctggccatccgcgccgccttcaaggcc
gccgagttcggcaagcaggtcgccgtcctcgtgcccaccaccgtgctcgccgagcagcac
gaacgcaccctccgatcgaggctctcgggataccccttccgcatcgagagcctctcccga
ttcaagtccgacgcgcagcagcggcagatcatccgcgacgccgccaagggccagatcgac
atcctcgtcggcacccaccgcatcctcagcgacgacgtccgcttcgccgacctgggcctg
gtcgtcatcgacgaggagcagcgcttcggcgtggagcacaaggagcggctgctccgcctc
aggctcaccgtcgacgtcctcaccctctccgccacgcccatcccgcgaacgctccacatg
tccatgctgggcctgcgcgacatctccagcctgaccaccgccccgctggaccgccgcgcc
atcgtcaccgaggtcatccccttcaacgagcggcgggtccagcaggccatcgcccgcgag
ctcgcccgggaggggcaggtctacgtcgtccacaaccgcatcagcgacatcttctccttc
gccgactccatccagaaactcgccccgggcgcccgcgtcgtcgtgggccacgggcagatg
gacccgcacaccctcgaggacgtcatgctccgcttcatgcgccgcgacgccgacatcctc
gtctccaccaccatcatcgagtcgggcatcgacatccccaccgccaacaccatcatcatc
aacgacgccgaccgcttcggcctcgccgacctccaccagctccgcggccgcgtcggccga
tccaagcaccgcgcctactgctacctcatgcttcccaacgaccggccgctcaaggagacc
gccaggaagcgcctcaaggccatcgagcagtactccatgctcggcgcgggcttcaagatc
gcaatgcgcgacctggagatccgcggcgccggcaacctcctcggcgccgagcagtccggc
cacatcgccgccgtcggctacgagatgtactgccgactcctcgaccagaccgtccgcgag
ctcaagggcgagcgcccgcaccccaccatcagcgccaccggcatcgatatcgggatcacc
agcaggccccacaccccagccatccacccggcgatcgccgccgaggaccccgtcctcaac
gtccgcgacttctccctctactacggcgggtccaaggccctgcaccacatctccatggac
gtgccccgcggcaaggtcaccgccctcatcggcccatcgggctgcggcaagtccaccctc
ctccgcgccgtcaaccgcatgaacgacctcatcgccggcgtccgagtcaccgggcagatg
gtcctcaacggccagcccatctactcgcccgacgtcgacgtcatcgacctgcgcaagcgc
atgggcatggtcttccagaagcccaatcccttccccatgtcggtcttcgacaacgtcatc
tacccgctgaggatcgacggcgagaaccgacgaagcaccctcgaagaggcctgcgagcgc
tccctccgcgccgccgccctctgggacgaggtgaaggaccggctccgcgactcagccctt
ggcctctcgggcggtcagcagcagaggctctgcatcgcccgcgccatcgtcgccgacccc
gaggtgctgctgatggacgagccatgctcggccctcgaccccatcgccacgctccgcatc
gaggagctcatccaccaggtcagccagcgatacaccgtcctcatcgtcacccacaacatg
cagcaggccgcccgcgtcagcgattacaccgccttcctctacctcggccgcctcgtcgag
ttcgggcccaccgcagaggtcttccagaggcctcacctccccgagaccgagcagtacgtc
accggacgcttcggctga
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