Leptolyngbya sp. 15MV: J4558_16040
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Entry
J4558_16040 CDS
T09999
Name
(GenBank) RDD family protein
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lepv
Leptolyngbya sp. 15MV
Pathway
lepv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lepv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J4558_16040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lepv03021
]
J4558_16040
03400 DNA repair and recombination proteins [BR:
lepv03400
]
J4558_16040
Enzymes [BR:
lepv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J4558_16040
Transcription machinery [BR:
lepv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J4558_16040
DNA repair and recombination proteins [BR:
lepv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J4558_16040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RDD
RNA_pol_Rpb1_2
MARVEL
NUC
Motif
Other DBs
NCBI-ProteinID:
QYU66482
LinkDB
All DBs
Position
complement(3076814..3079138)
Genome browser
AA seq
774 aa
AA seq
DB search
MAETVYDRVNDFTAVKVTLASPNDIRAWSYGEVKKPETINYRTYRPEKDGLFCERIFGPE
RDYECACGKYRGTKYKGIICDRCGVKVTHSRVRRKRMGHINLACPIVHIWFFKSMPSRLG
TLLAMKTSDLEKIIYYQDYVVTDPGDTELKFKQVLTEDEHREAQEKFGNAFRASMGADAV
RELIEKLDLNEESKQLKNELRETRSKQKIKDLAKRLKLIEQVRKSENKPAWLVMDVIPVI
PPDLRPLVLLESGNFATSDLNDLYRRIINRNNRLKKLMDLNAPEVIIRNEKRMLQQAVDA
LFDNNRCRRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPELRLHQ
CGLPKKIALELYQPFIIRKLKEHGLADTIKSAKRMLERRDPEVWDILAVTGNKTLTSELS
RKHTSPTLVEFQSKNSALPDWRLQMQNAVRQRGSAVTRHANPSQKQTLAQPASATAANGH
KALKLEIESVGNNGSADNPRLRSAMERIERSRQQFLPKASERSARGENLSRQRKFPFDVV
TPKKSQSLRNDQVPRSAYGSDQIAIAKVRSENKAYDTNKLPKLESVIKEPRKLGLIVDAD
DFQEPLFTDERENLEHYIKEGDPEVRDLADEQDVEDEFDDLAPFSMRFGSGLFDLIIGIF
ATLIILSPFMMSGGSWASISGVLAVIGALGIFMFLYLTASIAFWGKTFGMRLFSLELIDA
EANAYPTVHQAAVNSAVYLLSIALGGLGFVTIPFSNERRAIHDIVSGTLLVREA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaccgtgtacgaccgggtgaacgatttcacggctgtgaaggtgacgctggcg
tcgcccaacgacatccgggcgtggtcctacggcgaggtgaagaagcccgagacgatcaac
taccggacgtaccgccccgagaaggacggtctgttctgcgagcggatcttcgggcccgag
cgggactacgagtgcgcgtgcggaaagtaccgcgggacgaagtacaaggggatcatctgc
gaccgctgcggggtgaaggtgacgcactcccgggtgcgtcgcaagcggatgggtcacatc
aacctggcgtgcccgatcgtgcacatctggttcttcaagagcatgcccagccggctgggc
acgctgctggcgatgaagacgtcggatctcgagaagatcatctactaccaggactacgtg
gtgacggatccgggggacacggagctgaagtttaagcaggtgctgacggaggacgagcac
cgcgaggcgcaggagaagttcggcaacgcgttccgggcgtcgatgggcgccgacgcggtg
cgggagctgatcgagaagctggacctcaacgaggagtccaagcagctcaagaacgagctg
cgtgagacgcggagcaagcagaagatcaaggatctggccaagcgtctgaagctgatcgag
caggtgcgcaagagcgagaacaagccggcgtggctggtgatggacgtgatcccggtgatc
ccgccggatcttcggccgctggtgctgctggagagcgggaacttcgcgaccagcgacctc
aacgacctgtaccggcggatcatcaaccggaacaaccgtctcaagaagctgatggacctc
aacgcgccggaggtgatcatccgcaacgagaagcggatgctgcagcaggcggtggacgcg
ctgttcgacaacaaccgctgccggcgtccggtgctcgggtcgagcaaccggccgctcaag
agcctgacggacatgatcaagggcaagcagggtcggttccgcgagaacctgctgggcaag
cgcgtggactactcggcgcgttcggtgatcgtggtgggccccgagcttcggctgcaccag
tgcggcctgccgaagaagatcgcgctggagctgtaccagccgttcatcatccgcaagctc
aaggagcatggccttgcggacacgatcaagagcgccaagcggatgctcgagcgtcgcgat
cccgaggtgtgggacattctcgctgtaactggcaacaagacattgacgtcggagctttcg
cgaaaacacactagtccaaccttggttgagtttcagagtaagaattcagcattgccggat
tggcgtttacagatgcagaatgccgttcgccagcgcggttccgctgtaacaagacatgcg
aacccatcgcagaagcagaccctcgcccaacccgcatctgccactgcggccaatggtcat
aaagctttgaagctggagatcgagagcgtcggtaacaacggttcagcagacaatccacga
cttcgttcggctatggagaggatagaacgctccagacagcagttcctccctaaggcttct
gaacggtcagcacgcggagaaaacctttcccgacagcggaaattcccctttgatgttgta
acaccgaaaaagtcgcagtctcttcgaaatgaccaagtccctagatctgcatatggctca
gatcaaattgcgatcgccaaagtacgatctgaaaacaaagcgtatgatacgaacaaactc
ccgaaactcgaaagtgttataaaggagccgcgaaaacttggccttatagtcgatgccgac
gattttcaagagcctttattcactgatgagcgtgaaaatttagagcactacataaaagaa
ggtgatcctgaagtacgagacttagcggatgagcaggatgtcgaagatgaatttgatgat
cttgctccgttttcgatgcggttcggttcgggattgttcgatcttataatcggcattttc
gcgactctcataattctttcgccgtttatgatgagcgggggttcgtgggcaagtatatcc
ggcgttttggccgtcatcggagcacttgggatatttatgttcctttatctaacggcttca
attgcgttctggggcaaaaccttcggtatgcgccttttctcgcttgaactaatagatgcc
gaggcaaatgcctatcctacagttcatcaagctgccgttaattcagcagtttaccttctt
tccatagcgcttggtggtctggggttcgttacgattcctttcagcaatgagcgacgagct
attcacgatatcgtatccggtactctcttagttcgagaggcctga
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