Leptolyngbya sp. 15MV: J4558_21015
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Entry
J4558_21015 CDS
T09999
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lepv
Leptolyngbya sp. 15MV
Brite
KEGG Orthology (KO) [BR:
lepv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lepv03032
]
J4558_21015
03400 DNA repair and recombination proteins [BR:
lepv03400
]
J4558_21015
Enzymes [BR:
lepv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J4558_21015
DNA replication proteins [BR:
lepv03032
]
Prokaryotic type
DNA Topoisomerases
J4558_21015
DNA repair and recombination proteins [BR:
lepv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J4558_21015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QYU67385
LinkDB
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Position
complement(3966348..3967625)
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AA seq
425 aa
AA seq
DB search
MPLDVTAPIADPKAAAREAGLRHVSDEQPGIGRRPVGKGFSYRAPQGGAVRDAATLKRIR
ALAIPPAWTQVWICPHANGHIQATGRDLKGRKQYRYHAQWRAVRDSTKYERLCEFARMLP
AIRGRVAQDMARPGLPREKVLATVVHLLETTLIRVGNDDYARTNDSYGLTTLQDHHVEID
GTALRFAFKGKSGREWNVGLKDRRVARIVRACQDLPGQELFQYRDQDGTVRDVTSADVNG
YLREISGEDITAKDFRTWAGTVLAALALREFERVDSQAAAKRNIRAAIARVAARLGNTPT
ICRQCYIHPAILDRYLEGPLADDVETEVTNELREHLGQLPPEEAAVLASVASARTTLPPG
YHGSAKVQAWIVVRGDTLPSNRAVFIRSPWRKESFQRLVALVFEPGARPYAVEAWKMGEL
STNEP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgacgtgacggccccgatcgccgaccccaaggccgccgcgcgggaggccggg
ctgcgccatgtgtcggacgagcagcccgggatcggccgccggcccgtgggcaagggcttt
tcctaccgcgcgccccagggcggcgcggtgcgtgatgccgcgaccctcaagcgcatccgc
gcgctcgccatcccgccggcctggacgcaggtgtggatctgcccgcacgccaacggccac
atccaggccaccgggcgcgacctgaaggggcgcaagcagtatcgctaccatgcgcagtgg
cgggccgtgcgcgattcgacgaaatacgagcggctctgcgagtttgcccgcatgctgccc
gccatccgcggccgggtggcgcaggacatggcccgccccggcctgccgcgcgagaaggtg
ctggcgacggtggtgcacctgctggaaaccacgctgatccgcgtcggcaacgacgactac
gcccgcacgaacgacagctatggcctcaccaccttgcaggaccaccatgtcgagatcgac
ggcaccgcgttgcgcttcgccttcaagggcaagagcggccgcgaatggaatgtcgggctg
aaggaccgccgcgtcgcccgcatcgtgcgcgcctgccaggacctgccggggcaggagctg
ttccagtaccgagatcaggacggcaccgtgcgggacgtgacctcggcggacgtcaacggc
tatctgcgcgagatcagcggcgaggacatcaccgccaaggatttccgcacctgggccggc
accgtgctggccgcgctggcgctgcgcgaattcgagcgggtggacagccaggccgcggcc
aagcgcaacatccgtgccgcgatcgcacgggtggccgcgcggctcggcaacacgccgacg
atctgccggcaatgctacatccatccggcgatcctcgaccgctacctggaaggccccctg
gcggacgatgtggagaccgaggtgaccaacgagttgcgcgagcatctcgggcagttgccg
ccggaggaggccgcggtgctggcctcggtcgcgtcggcgcggaccacgctgccgcccggg
taccacgggtcggcgaaggtccaggcctggattgtcgtcaggggcgacacgctgccgtcg
aaccgcgcggtgttcattcggtcgccgtggcggaaggagagtttccagcggttggtggcg
ctggtgttcgagcctggcgcacgcccgtacgccgtcgaggcgtggaagatgggtgagctc
tccacgaatgagccgtag
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