Leptolyngbya sp. 15MV: J4558_25515
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Entry
J4558_25515 CDS
T09999
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lepv
Leptolyngbya sp. 15MV
Pathway
lepv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lepv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4558_25515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lepv03019
]
J4558_25515
03400 DNA repair and recombination proteins [BR:
lepv03400
]
J4558_25515
Enzymes [BR:
lepv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4558_25515
Messenger RNA biogenesis [BR:
lepv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J4558_25515
DNA repair and recombination proteins [BR:
lepv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J4558_25515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
TPR_4
Motif
Other DBs
NCBI-ProteinID:
QYU68154
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All DBs
Position
4692030..4693196
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AA seq
388 aa
AA seq
DB search
MRALFGYDDFRGRQADVIARVLAGESSLAVMPTGAGKSLTYQLPATMLPGTCVVVSPLIA
LMHDQLRAARANGIRAATLTSQDADWRETQDLFRAGELDLLYVAPERASQPHFRELLTAS
PLCLFAIDEAHCVSEWGHDFRPDYRQLRPLMDAFGQVPRLALTATADARTREDVREQLGI
PADGIVLAGFDRPNIRYALRHRDNPVRQLATLMESEPGAGIVYVPTRRKAEELADKLAAA
TGRVVRPYHAGLEPGVRAANQAAFVASEDMVIVATVAFGMGIDKPDVRFVAHAGVPKSIE
SYYQETGRAGRDGDPAQAVMLWGAGDFAQARQRLAEVPEDRRAGERARLDALAALVETPG
CRRAMLLRHFGEEPPGRFPRLNRSRPLR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgcgctgttcgggtatgacgatttccggggccgccaggcggatgtcatcgcgcgg
gtgctggcgggcgaatcgagcctggcggtgatgccgacgggggcgggcaaatcgctcacc
taccagctgcccgcgaccatgctgccgggcacttgcgtggtcgtctcgccgctgatcgcg
ctgatgcacgaccagctgcgggcggcgcgggcgaacggcatccgcgcggccacgctgacc
agccaggacgccgactggcgcgagacgcaggacctgttccgcgcgggcgaactggacttg
ctctacgtcgcgcccgagcgcgccagccagccgcacttccgcgagttgctgacggcttcg
cccctgtgcctgttcgccatcgacgaggcgcattgcgtgtccgaatgggggcacgatttc
cgtcccgactaccgccagctcaggcccttgatggatgcattcggccaggtgccgcggctg
gcactgacggcgaccgccgatgcccgcacgcgcgaggacgtgcgcgaacagctcggcatt
ccggccgatggcatcgtcctggcggggttcgaccggcctaacatccgctatgccctgcgt
caccgcgacaatcccgtgcgccagctcgcgacgctgatggagagcgaacccggcgcgggg
atcgtctatgtgccgacccggcgcaaggcggaggaactggccgacaagctggcggcggcc
accggccgcgtggtccgcccctatcacgccgggctcgaaccgggcgtgcgcgcggccaac
caggccgccttcgtggcgagcgaggacatggtgatcgtcgccacggtcgcgttcgggatg
gggatcgacaagccagacgtgcgcttcgtcgcccacgcgggcgtgcccaagtcgatcgag
agctactaccaggaaaccggccgcgcggggcgcgatggcgatccggcgcaggcggtgatg
ctgtggggcgcaggcgatttcgcgcaggcgcgccagcggctcgccgaagtgcccgaagat
cgccgcgcgggcgaacgagcgcggctcgatgccctcgccgcgctggtcgagacgccgggc
tgtcgccgcgcgatgctgctgcgccatttcggtgaggagccgccgggccggtttccgcgt
ctgaaccgatcgcgtccattgcggtaa
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