Leptotrichia sp. oral taxon 498: BCB68_00560
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Entry
BCB68_00560 CDS
T04995
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
leq
Leptotrichia sp. oral taxon 498
Pathway
leq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
leq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCB68_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leq03021
]
BCB68_00560
03400 DNA repair and recombination proteins [BR:
leq03400
]
BCB68_00560
Enzymes [BR:
leq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCB68_00560
Transcription machinery [BR:
leq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BCB68_00560
DNA repair and recombination proteins [BR:
leq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BCB68_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ASQ47592
UniProt:
A0A222P6Z0
LinkDB
All DBs
Position
complement(136260..139706)
Genome browser
AA seq
1148 aa
AA seq
DB search
MDKLIERYSFGKIVDRGEMPHFLEFQINSYEDFLQTKLPPQKRENKGFESIFNEIFPIES
SNGLLKLEYLWYEIHENDEPLNDELECKKRGKTYSGQLKVRLKLTNKRTGEIQETLVHFG
DIPLMTDKATFIINGAERVVISQLHRSPGITFNKELNIQTGKDVFIGKIIPYKGTWLEFE
TDKNDVLNVKIDRRKKVLLPVFLKAVDFFESNEQIMDEFFEAKTIDLSEIYEKYKGNELD
EILRLKLEGSFVREDVIDEETGEFIVESKELIDGVVIEKILDEKLQKLDIWEVKPEDRII
ANAMLNDSTTTNDEAVIEVFRKLRPGDLVTVDSARSLVKQMFFNPQRYDLADVGRYKINK
RLKINVPEDVIVLTKEDVLHTIEYVKNLVSGEGFTDDIDNLSNRRVRGVGELLSIQIKGG
MLKMSKMVREKMTIQDITTLTPQSLLNTKPLNALILEFFGSGQLSQFMDQSNPLSELTHK
RRISALGPGGLSRDRAGFEVRDVHNSHYGRICPIETPEGPNIGLIASLSTYGKVNKYGFI
ETPFVKIKNGKADFDDIEYLAADEEEGLFIAQADTPIDKDGNFLTDEVVCRYGDEIVHID
KSKVDILDVSPKQLVSVSAGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPYVGTGLER
KVAVDSGAVITSQATGTVTYVDARKIVVTDEDGKEYSHRLLNFEKSNQSMCLHQKPITDL
GAKVKKGDIIADGPSTAGGDLALGKNILLAFMPWEGYNFEDGILISERLRKDDVFTSIHI
EQFDTEARTTKLGDEEITREIPNVSEEALKNLDENGIIRVGAHVVPDDILVGKVTPKGET
EPPAEEKLLRAIFGEKAKDVRDTSLRLPHGVKGTVVDVLELTKENGDDLKAGVNKLIRIY
IAEKRKIMVGDKMSGRHGNKGVISRVLPIEDMPHLEDGTPIDVCLNPLGVPSRMNIGQVL
EVHLGLAIGDIDKYIATPVFDGASEDDVKNYLEEAGYSRTGKVKLIDGRTGQPFDNPVTV
GRMYMLKLHHLVEDKMHARAIGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASNIL
QEMLTVKSDDISGRTKTYEAIVKGEAMPEADAPESFRVLIKEFQSLGLDVALYDKDGQQI
ELDKNVDA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacttattgaaagatatagttttggaaaaatagtagacagaggggaaatgcca
cattttttagaatttcagataaattcttacgaagattttttacagacaaaattgccacct
caaaaaagagaaaataaagggtttgagtcgatttttaacgaaatttttccgattgaatca
agcaacggactgttaaaattagaatatttgtggtatgaaattcacgaaaatgacgagcca
ttaaacgacgaactagagtgtaaaaaaagaggtaaaacatattccggtcaattaaaagtt
agattaaaattaactaataaaagaacaggagaaattcaggaaacattagttcattttgga
gatatacctttaatgacagataaagcgacattcattataaatggagcagaaagagttgtc
atttcacagttacatagatctccaggaataacttttaataaagaattgaacattcagacg
ggaaaagatgtatttattggaaagataattccttataaaggaacttggcttgagtttgaa
acggataaaaatgatgttcttaatgtaaaaattgatagaaggaagaaagtcttacttcca
gttttcttaaaagcagttgatttttttgaatcaaacgaacaaattatggatgagtttttt
gaagctaaaactattgatttgtcagaaatttatgaaaaatataaggggaacgagttagac
gaaattttgcgtttaaaactggaaggaagttttgtaagagaggatgtaattgacgaagaa
acaggggaatttattgttgaatctaaagaattgattgacggagttgtcattgaaaaaata
ttggatgaaaaacttcaaaaacttgatatttgggaagtgaaacctgaagatagaattatt
gcgaatgcaatgttaaacgacagcacaacgacaaatgatgaggctgtaatagaagtgttt
agaaaactaagaccaggggatttagttacagttgatagtgctagatcacttgtaaaacag
atgttttttaatcctcaaagatatgatctagcagatgtaggaagatataaaattaataaa
aggcttaaaattaatgtgccagaagatgtaattgtacttacaaaagaagatgttttacac
acaattgaatatgtaaaaaatcttgtgagtggggaaggatttacagatgatattgataac
ttgtcgaaccgtcgtgtgagaggagttggagaacttttatccattcagataaaaggcgga
atgttaaaaatgtcaaaaatggtaagagaaaaaatgacaatccaagatattacaactttg
acaccacaaagcttgctaaatacaaaaccattaaatgcgttaattcttgaattttttgga
agtggacaattgtcgcaatttatggatcagtcaaatccattgtcagaattgactcataaa
agaagaatttctgcgttaggacctggaggactttcaagagatagagcgggatttgaagtg
cgtgacgttcataattcacactatggtagaatttgtccaatagaaacaccagaaggacca
aatatcggacttatcgcttcactttcaacctatggaaaagttaataaatatggatttatc
gaaactccatttgtaaaaattaaaaatggtaaagcggattttgatgacattgaatatttg
gcagcggatgaagaagaaggattatttatcgcacaggcggatactcctattgacaaagat
ggaaatttcttaacagatgaagttgtttgccgttacggagatgaaattgtgcatattgac
aaatctaaagtcgatatattggatgtgtcgcctaaacagcttgtgtcagtgtcagcggga
cttattccatttttagaacatgatgatgccaatcgtgcgctaatggggtcaaatatgcaa
cgtcaagcagtacctttgcttaaaacagaagcaccttatgtgggaacaggacttgaaaga
aaagtggctgtggattctggagcagtaattacttcacaagcaactggaacagttacttat
gtcgacgctagaaaaatagttgtgacagatgaagatggaaaagagtactcacacagactt
ttgaattttgaaaaatcaaatcagtctatgtgtcttcaccaaaaaccaattacagatttg
ggagcaaaagttaaaaaaggtgatataattgctgacggaccttcaacagctggaggagat
ttagcacttggaaaaaatattttacttgcgtttatgccttgggaaggatataactttgaa
gatggaatcttgatttcagaaagacttcgtaaagatgatgtatttacttcaattcatatc
gaacaatttgatactgaagcaagaacaacaaaattgggagatgaagaaattacaagagaa
attcctaatgtatctgaagaagcgcttaaaaaccttgatgaaaatggaattataagagtt
ggagcacacgttgtcccagatgatattttagtcggaaaagttacacctaaaggggaaact
gaaccgcctgccgaagaaaagttgcttcgtgcaatattcggagaaaaagcaaaagatgtg
agagatacatcgcttagacttccacatggagtgaaagggacagttgtcgatgtattggaa
ttaactaaagaaaacggagatgacctaaaagctggagtaaataaattaattagaatttat
atcgctgaaaaaagaaaaataatggttggagataagatgtcgggacgacatggaaataaa
ggggtaatttcaagagtattgccgattgaagatatgccgcatttggaagacggaacgcca
attgatgtctgccttaatccacttggagtgccatcacgtatgaatattggacaggtatta
gaagttcacttgggacttgcaattggagatattgacaaatatattgcaacacctgtattt
gatggtgctagcgaagatgatgtgaaaaattatttagaagaagctggatacagtagaact
ggtaaagtaaaattaattgatggaagaactgggcaaccgtttgacaatcctgtaacagtt
ggtcgtatgtatatgttaaaacttcaccacttggtagaagataaaatgcacgccagagca
attggaccatattcacttgtcactcaacagccacttggaggaaaagctcaatttggtgga
caaagacttggagaaatggaagtttgggcattggaagcttatggggcatcaaatatcttg
caggaaatgttgactgtaaaatcagatgacatcagcggaagaacaaaaacttatgaagca
atcgtaaaaggagaagcaatgccagaagcagatgcaccagaatcattcagagtgcttata
aaagaattccagtcacttggattagatgtggctctttatgataaagatgggcagcaaatt
gaattagataaaaatgttgatgcataa
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