Leptotrichia sp. oral taxon 498: BCB68_06030
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Entry
BCB68_06030 CDS
T04995
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
leq
Leptotrichia sp. oral taxon 498
Pathway
leq03030
DNA replication
leq03430
Mismatch repair
leq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCB68_06030 (polC)
03430 Mismatch repair
BCB68_06030 (polC)
03440 Homologous recombination
BCB68_06030 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leq03032
]
BCB68_06030 (polC)
03400 DNA repair and recombination proteins [BR:
leq03400
]
BCB68_06030 (polC)
Enzymes [BR:
leq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCB68_06030 (polC)
DNA replication proteins [BR:
leq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BCB68_06030 (polC)
DNA repair and recombination proteins [BR:
leq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BCB68_06030 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
HHH_3
RNase_H_2
tRNA_anti-codon
DNA_pol_A_exo1
Rv2179c-like
DEDDh_C
T2SSK
Zn_ribbon_8
PIN_2
Motif
Other DBs
NCBI-ProteinID:
ASQ48520
UniProt:
A0A222P9J0
LinkDB
All DBs
Position
complement(1224515..1229053)
Genome browser
AA seq
1512 aa
AA seq
DB search
MEDSIKEEKYRKIKPSVGFLQKYNIKSFEIKFVNMFALEKRIVMSIVIGDYENAIDDISK
LRKLICKKERETKIEIKFDVDEELIFNDVKGFITFVIEYKKTEKNKYAVYLTNYEIKIFG
NIIYLELLSQEAVKKMKQDEIFKALEMRISKVLNRNLKIEIVDKNFESNINDGNNENNDN
KKNKKPLVGEVLPENIIKGSSLEYSSALNGESSFKKSKFKGEKIENAQKFEISDLKNIKI
VKNDGKIIKPVEVEGKIFKIDIRETKNNSLMYDFLITDYNDSINCKIFLNPKDEAQIAIL
KVNDWVKVKGYYKKDDFYTEDYIGVQDLESIEAEETKKEDNAPKKRVELHAHTNMSEMSG
VMSIKDYAKRAKEFGHSAIAVTDFGVVHSFPFAFKEANENFKIIYGVEAYVVDDEAQMIT
NPKDLGIEEETYVVFDIETTGFDPFNDKIIEIGAVKMKGKEIIDEFSEFVNPKIPIPEEI
VKLTSITDEMVKDAPDIKTILPRFLEFCGDSTVVAHNAKFDVGFIKQKSIDQNLEFSPSV
VDTLPLARALLTNEKKFGLANLTKYFGIILESHHRAIDDARATAEVFQKFFNMIITKGIL
TLKDINMNLQPNIQNAETLNTMILVKNQKGLRDLYELISKSHIDYFGMRKPRIPKTLLKQ
MRENLLLASSATGIYGNRGELINLYLRGEIEEIEEKAKFYDYIEIQPPITYNELVEKNTS
EIENLEVIKEMNKYFYDLGKRLGKIVVATGDVHYLDKREAINRNVLLLGSGNLRKTKFVD
GSRYEFFDRELYFRTTEEMLEEFKYLGDEIANEIVVENTNKIADMIDAGIRPVPEGFYPP
KIKGAEELVRKMTYDKLEELYGDDVDQVLKERLEKELNSIIGNGFSVLYLIAQILVKKSV
KKGYLVGSRGSVGSSIVAYLMGITEVNGLYPHYRCPNCKHTEFMNEEGNGVDYPDKNCPK
CGTKYIKDGHAIPFEVFMGFNGEKVPDIDLNFSGEYQGKIHKYTEWLFNSDALENIENIE
DIEKIINFEDFENPKNSEYPETSENVFRAGTISTLAEKNAFGYVKKYLEESERTEEIKER
KAEVTRLAMRCEGARKTTGQHPGGMIVVPKDKSIYDFCPIQRPANDMKSNFKTTHFDYHV
MDEQLVKLDILGHDDPTTLRILQDLTGVDIYKIPLDDKEVMSLFSGTQALGVSPDDIGSQ
TGTSGIPEFGTSFVKQMLVDTRPKTFAELVRISGLSHGTDVWLNNAQDYVRSGVATLSQI
ITVRDDIMNKLIDDGLDKSLAFKIMEFVRKGRPTKDPDKWKEYSALMKEKGVEQWYIDSC
EKIKYMFPKGHAVAYVMMAVRIAYFKVHYPVEFYAAFLNRKVGDFKMTTMFFEKKKSGTE
EDSPSLKKLKNLRRELESNPNLNAKQKQELFLYEILIEMNYRNIELAKPNVLTSNAKLFT
ITEDKKIQLPLIAVDGLGESVAEKIVSEREKDPFLSLEDLTKRTKLNKTVLKILEDYECV
EGIQKENQGKLF
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggaagatagcattaaagaagaaaaataccgtaaaataaagccatccgtaggtttttta
caaaaatataatataaaaagttttgaaataaagtttgtgaatatgtttgcacttgaaaaa
agaattgttatgagtattgtcattggcgattacgaaaatgcaattgatgatatttcaaaa
ttaagaaaattgatttgtaaaaaagagagagaaaccaaaattgaaataaagtttgacgtg
gatgaagaactgatttttaacgatgtaaaaggatttattacctttgttattgagtataaa
aagacagaaaaaaataaatatgctgtgtatttgacaaattatgaaatcaaaatttttgga
aatataatttatttagagcttttgtcgcaggaagctgtaaagaaaatgaaacaagatgaa
atttttaaagctttggaaatgagaatttctaaagtgttaaacagaaatttaaaaatagaa
attgtagataaaaattttgaaagcaatataaatgacggaaataatgaaaataatgataac
aaaaaaaataaaaaaccactcgttggagaagttttacccgaaaatattataaaaggttct
tcacttgaatattcatctgccttaaatggagaaagcagctttaaaaaaagtaagtttaaa
ggtgaaaaaatagaaaatgcgcaaaaatttgaaatttcagatttaaaaaatataaaaatt
gtaaaaaatgatggaaaaataataaaacctgttgaagttgaagggaaaatttttaaaatc
gatataagagaaacaaaaaataattctttaatgtatgattttttaataaccgattacaat
gattcgataaattgtaaaatttttttaaatcctaaagatgaagcacaaattgcgatactt
aaagtaaatgattgggtaaaggtaaaaggatattacaaaaaagatgatttttataccgaa
gattacattggagtgcaagatttggagtcgattgaagcagaagaaactaaaaaagaggat
aatgcaccaaaaaaaagagttgaacttcatgctcacacgaatatgagtgaaatgagcgga
gttatgtcaattaaagattatgcaaaaagagcaaaagaatttgggcatagtgccatcgcg
gtaacagattttggagtggtgcattcattcccgtttgcatttaaagaagcgaatgaaaat
tttaaaattatttacggagtggaagcatatgttgtagatgatgaagctcaaatgattact
aatccgaaagatttgggaattgaagaagaaacatatgttgtattcgatatagaaactact
ggatttgatccgtttaatgataaaataattgaaattggggcagtaaaaatgaaagggaag
gaaattattgacgaattttctgaatttgtaaatcctaaaattcctattcctgaagaaatt
gtaaaacttacttcaattactgatgaaatggtaaaagatgctcctgacatcaaaacaatt
ttaccaagatttttagaattttgtggcgattccacagttgttgcacataatgcaaaattt
gatgtgggattcattaagcaaaaatcaattgaccaaaatttagagttttccccaagtgta
gttgatacccttccacttgcaagggcacttcttactaatgaaaaaaaatttggattggca
aatttgactaaatattttggaataatattagaatcacaccatagagctattgacgatgca
agagcaactgctgaagtttttcagaaattttttaatatgattataacaaaaggaattctg
acactaaaagatataaatatgaatcttcaaccaaatattcaaaatgctgaaacattgaat
acgatgattttagtaaaaaatcaaaaaggattaagggatttatatgagttaatttccaaa
tcgcacattgactactttgggatgagaaaaccgcgaattccaaaaacattattaaaacaa
atgagagaaaatttacttcttgcaagttcagcaactgggatatatggaaatagaggggaa
ctcataaatctttatttgcgtggagaaatagaagaaattgaagaaaaggcaaaattttat
gactatatagaaatacaaccaccaattacatataatgaactggtagaaaaaaatacgagt
gaaattgagaatttagaagtaataaaagaaatgaataaatatttttatgatttggggaaa
agattaggaaaaatagttgttgctacaggagatgtacattatttagacaaaagagaagca
attaatagaaatgttttacttttaggaagtggaaatttaagaaaaactaagtttgtcgat
ggttcaagatacgaattttttgatagagaactatattttaggacaactgaagaaatgctt
gaagaatttaaatatttaggcgatgaaattgcaaatgaaattgttgttgaaaatacaaat
aaaattgctgatatgattgatgccggaataagaccggttcctgaaggattttatccacca
aagataaaaggggctgaagagttagtaagaaaaatgacttatgataaattagaggagctt
tatggcgatgatgttgatcaggttttgaaagaaagactggagaaagagttaaattcgatt
attggaaatggcttttctgtactttatttaattgcgcagatattggttaaaaaatcggta
aaaaaaggatatttagttggttcccgtggttcagtcggttcgtctattgtcgcctatctt
atgggaattactgaagtaaatggactttatccacactacagatgtccaaattgcaagcat
actgaatttatgaatgaagaaggaaatggagttgactatcctgataagaattgtccaaaa
tgtggtacaaaatatataaaagatggacatgcaataccatttgaagtgtttatgggattt
aacggagaaaaagtgccagatattgacttaaatttttctggagaatatcaagggaaaatt
cataaatatactgaatggctatttaattcagatgctcttgaaaatattgaaaatattgaa
gatattgaaaaaattataaattttgaagattttgaaaatcctaaaaattctgaatatcct
gaaacttctgaaaatgtatttcgtgctggaacaatttctacattagcagaaaaaaatgct
tttggttatgtaaaaaaatatttggaagaaagtgaaagaacggaagaaataaaagagaga
aaagctgaagttacaagacttgcgatgagatgtgaaggagcgagaaaaacaactggacag
catccaggaggaatgatagtagttccaaaagacaagtcaatttacgatttttgtccaata
caaagacctgcaaatgatatgaaatctaattttaaaacaacgcattttgactatcatgtt
atggacgagcaactggtaaaattagatattttaggacacgacgatccaactacgcttaga
attttacaggatttgacgggagttgacatctataagataccgcttgacgataaagaagtc
atgagtctttttagtggaactcaagcacttggagtgagtccagatgatataggttctcaa
actggaacttcagggattccagagtttgggacatcttttgtaaaacaaatgttagttgac
acaagaccaaaaacttttgcggaattggtaagaatttcagggctttcgcacggaacagac
gtctggctaaataatgcgcaggactatgtgagaagtggagttgcaacattgagccagatt
ataacggtgagagatgacattatgaataagcttatcgacgacggactggataaatcttta
gcatttaaaataatggaatttgtgagaaagggacgacctacaaaagatcctgataaatgg
aaagaatattcagcattgatgaaagaaaaaggtgttgagcagtggtacatagattcttgt
gaaaaaataaaatatatgtttccaaagggacacgctgtggcatatgttatgatggcggtg
agaattgcatattttaaagttcattatcctgtggaattttatgcagcttttttaaataga
aaagtcggagattttaaaatgactacgatgttttttgaaaagaaaaaatctggtacagaa
gaagattcaccttctctaaaaaaattgaaaaatttaagaagggagctggaatcaaatcca
aatttgaatgcaaaacaaaagcaggaattatttttgtatgagattttaatagagatgaat
tatcgtaacattgaacttgcaaagccaaatgttttgacatccaacgcaaagcttttcaca
ataacagaagataaaaaaattcagctgccacttattgctgtggacgggcttggtgagtct
gttgctgaaaagattgtatcagagcgggaaaaagacccatttttgtcactggaagatttg
acgaagagaacgaagttaaataaaactgtattaaaaatactggaagattatgaatgtgtg
gaaggaatacaaaaagaaaatcaaggaaaattattttaa
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