Leclercia sp. Colony189: GNG29_04205
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Entry
GNG29_04205 CDS
T06321
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ler
Leclercia sp. Colony189
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ler03016
]
GNG29_04205 (thpR)
Enzymes [BR:
ler01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GNG29_04205 (thpR)
Transfer RNA biogenesis [BR:
ler03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GNG29_04205 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QGW15780
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All DBs
Position
complement(888410..888940)
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AA seq
176 aa
AA seq
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MSESKRLFFAIEMPAPLQRQIVRWRADHFAPEAGRPVAGGNLHLTLAFLGDVSPEKQQAL
AAMAGRIRQPEFTLTLDDAGQWLRSRVVWLGTRQPPRGLLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDASHAVAIPPPGFQWSFAVKDFVLYESRFAGGRTRYTPLQRWTLTE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcaaaaaggttgttttttgccattgaaatgcctgccccgctccagcggcag
atcgtccgctggcgcgccgaccactttgcgccggaagcgggccgtccggtggcaggcggc
aacctgcacctgacgctggcgtttttaggggatgtcagccctgagaaacagcaggcgctg
gcagcaatggccggacgcatccgtcagccggagtttaccctgacgctggacgatgccgga
cagtggctgcgctcccgcgtcgtctggctgggtacccgccagccgccgcgggggttatta
cagcttgccaacatgttgcgggcccaggcggcgcgcagcggctgctatcaaagtccccag
ccgtttcatccgcatatcaccctgctgcgcgatgccagccacgccgtcgccattccgcca
ccgggttttcagtggtcgtttgcggtgaaagattttgtcctctacgagagccgtttcgca
ggcgggcgcacgcgctacacgccgctccagcgctggacgcttaccgaataa
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