Leclercia sp. Colony189: GNG29_04975
Help
Entry
GNG29_04975 CDS
T06321
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ler
Leclercia sp. Colony189
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ler03400
]
GNG29_04975 (sbcC)
DNA repair and recombination proteins [BR:
ler03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GNG29_04975 (sbcC)
Archaeal homologous recombinant proteins
GNG29_04975 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
IFT57
cobW
ABC_tran
AAA_15
nSTAND3
AAA_21
RsgA_GTPase
ABC_ATPase
MobB
NTPase_1
AAA_22
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QGW15922
LinkDB
All DBs
Position
complement(1053430..1056561)
Genome browser
AA seq
1043 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFLSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGVAYRAFWSQNRARNQPDGNLQVPRVELAQCK
DGKILADKVKDKLELVASLTGLDYDRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKAARSELEKRQAQAAGVVLLSEEQLQQLQQGLQVLTDEEAQLLAQQQ
GLQKDYQWLTRHDELVREQQRSKAAQQQAQQALTDATPELEKLHLAQPAALLRPHWERQQ
EQLAQLSQTEQQMLDVNTRLQSSTALRSGIRNGALRTHDRLQTELAALTQWLTNHDRFRQ
WGQEIAGWRAHFTQLNRDKTQIATLTGRITALRQKLAGLPESALTLTAEQTTSEMALQTQ
SRAARQRLTTLHARYQPLQQRSRQTRESVQKAQAELAKLNETLTLRRQQYKEKNQHYLDL
KTLCEQEEKIKKLESYRAELEAGKPCLLCGSTEHPAIAQYQALALTGNQRRRDAMEKEVA
ALKEEGLLVLGQVNALNSQLQRETSEAQTLFQDEQALTKEWNAVCETLSVQLNIQDDIAP
WLAKQEQYEQQLYQLSQRLTLQSQLSEEEAQLQLYQQQLLATRTAMAQTLHALSLAAPED
GTESAWLAEREKESLAWQERQTQHSALRERITALAPLLETLPATDSTQVESAIPDNWREI
HTECVSLQSQLATLQQQYTLESERLQQSQAQFAAALAASIFSDRETFLAALLDGDTVRRL
EQLKQTLENQIQQTTALLQQAGQRLNEHLEQRPAGLTTDAPALQEQLQQLGLKLRENTTR
QGEIRQQLKQDSDNRQHQQALMQQIEEAARLADDWGYLNALIGSKEGDRFRKFAQGLTLD
NLVWLANQQLMRLHGRYLLQRKASDALELEVMDTWQADAVRDTRTLSGGESFLVSLALAL
ALSDLVSHKTQIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIP
VQIKVKKINGLGYSRLDKEFAVL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaaccttaactcgctcaagggcgaatggaaaatc
gactttaccgccgaacccttcctcagcaatggcctgtttgctatcaccggcccaaccggc
gccgggaaaaccaccctgctggatgccatctgcctggcgctttaccacgagacgccgcgc
ctgaatacggtctcgcaatcgcaaaacgatctgatgacccgcgacaccgctgagtgcctc
gccgaggtcgagtttgaagtcaaaggggtagcttatcgtgcgttctggagccagaaccgg
gcgcgcaaccagccggacggcaacctgcaggtgccccgcgtggagctcgcccagtgcaag
gacgggaagatcctcgcagataaagtgaaggacaagctggagctggttgcctctctgacc
gggctggactatgaccgctttacccgctcgatgctcttatcccaggggcaattcgccgcc
tttctgaacgccaaaccgaaagagcgcgccgaactgctcgaggagctgaccggcacggaa
atctacggccagatctccgccatggtgtttgaaaaacataaggcggcacgcagcgagctg
gagaagcgccaggcccaggcggccggcgtggtgttgctcagcgaagagcagctacagcag
cttcagcaaggtttgcaggtacttactgacgaagaagcgcaactgctggcgcagcagcag
ggactccagaaagattatcagtggcttacccgccacgatgagctggtgcgggagcaacag
cgatcgaaggccgcgcagcaacaggcgcagcaggccctgacggacgccacgccggagctg
gaaaaactgcatctcgcccagcctgcggccctgctgcgcccgcactgggagcggcagcag
gagcagcttgcccagctttcgcagacggaacagcagatgctggatgtgaatactcgctta
cagtccagtacggcgctgcgttcaggcattcgtaacggggcgctgcgcacgcacgacagg
ctgcaaaccgagctggctgcactcacccagtggcttaccaaccacgaccgcttccgccag
tggggccaggagattgcaggctggcgcgcccacttcacccagcttaatcgcgataaaacc
cagatcgcgacgctgaccgggcgtatcacggcgttacgccagaagctggcgggattaccg
gagagcgctctgacgcttaccgcagaacagaccaccagcgagatggcactccagacgcag
tcccgcgcggcacgccagcgcctgactaccctgcatgcccgctatcagcctctgcaacag
cgatcgcggcagactcgcgaaagcgtgcaaaaggcccaggccgagctggcaaaactgaac
gaaaccctgacgctacgccgccagcagtacaaagagaaaaaccagcactatctcgatctc
aaaaccttatgtgagcaggaagagaagattaagaagctggagagctaccgggcggaactg
gaggccggaaagccctgcctgctctgcggctctaccgaacatccggccattgcccaatac
caggccctggcgctcaccggaaaccagcgccgccgggatgcgatggaaaaggaggtcgcc
gcactcaaagaggaaggcctgctggttctggggcaggtaaatgcgctaaacagccagctt
cagcgcgaaacaagcgaagcgcagacgctctttcaggatgagcaagcgctcactaaagag
tggaatgcggtgtgtgaaaccctctctgtgcagttgaacattcaggacgacatcgcccca
tggctggctaaacaggagcagtacgaacagcagctttaccagctgagccaacgcctgacc
ctgcaaagccagctgagtgaagaggaagcccagcttcagctttaccagcagcagcttctg
gcgacgcgcacggctatggcgcaaacgcttcatgccctgtcgctggcggcaccggaggac
ggtaccgagtcggcctggcttgcggaacgggaaaaagagtcgctggcctggcaggagcgg
cagactcagcacagcgccctgcgggagcgcatcaccgccctggcaccgctgctggagacc
cttccggcaacggattccacgcaggtggaaagtgcgatcccggataactggcgcgaaatc
cataccgagtgcgtctccctgcaaagccagctcgccacgctgcagcagcagtacacgctg
gaaagcgaacgtttacaacaatcgcaggcgcagtttgccgccgcgctggctgccagcatc
tttagcgatcgggagacatttctggcggccctgctggatggcgatacggttcggcgtctg
gagcagttgaaacagactctggagaatcagatccagcagaccacggccctgcttcagcag
gccggtcaacgactgaacgaacatctggaacaacgtccggcgggcctgacgacggacgcg
ccggccctgcaggaacagcttcagcagctcggcctgaaactgcgggaaaacaccacccgc
cagggggagatccgccagcagcttaaacaggacagcgacaatcgccagcaccagcaggca
ctgatgcaacaaattgaggaggcggcccgcctggcggatgactggggttatcttaatgcg
ctgatcggttccaaagagggggatcgcttccgtaagtttgcccagggcttaactctcgac
aacctggtatggctcgccaaccagcagctgatgcgtctgcatggccgctacctgctgcaa
cgcaaggccagcgacgcgctggagctggaggtgatggatacctggcaggcggatgccgtg
cgcgatacccgcaccctctccggtggcgaaagttttctggtaagcctggcgctggcgctg
gcgctttccgacctggtgagccacaaaacgcaaattgattcgctgttcctcgacgagggc
ttcggcaccctggacagcgaaacgctggataccgccctggacgcgctggatgcgctgaat
gccagcggcaaaaccattggggtgatcagccacgtcgaggcgatgaaggagcgcatcccg
gtgcagatcaaagtgaagaagattaacgggctggggtacagcaggctggataaggagttt
gctgttttgtaa
DBGET
integrated database retrieval system
