Leclercia sp. Colony189: GNG29_06475
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Entry
GNG29_06475 CDS
T06321
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ler
Leclercia sp. Colony189
Pathway
ler00330
Arginine and proline metabolism
ler00480
Glutathione metabolism
ler01100
Metabolic pathways
ler01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
GNG29_06475 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
GNG29_06475 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
GNG29_06475 (speF)
Enzymes [BR:
ler01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
GNG29_06475 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QGW16202
LinkDB
All DBs
Position
complement(1377537..1379735)
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AA seq
732 aa
AA seq
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MKTLKIATSRTCPHCFTTTRDMVDVNDSDYIDVAAVVLAVSDISNGTIEKIDATGFNIPV
FISTHKEEIVPAEYLSRIQGVFECTDNCNDFYGRQLEAAAQKYETQLRPPFFRALVDYVK
QGNSAFDCPGHQGGQFFRRHPAGNQFVDFFGETLFRADLCNADVAMGDLLIHEGAPCTAQ
QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPYGFIGGIDAHCFEERYLRERIAEVAPGRARDQRPFRLAVIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLELNENDPGILVTQSVHKQQAGF
SQTSQIHKKDRHIKGQPRYVPHKRLNNAFMMHASTSPFYPLFAALDINARMHEGQSGRNM
WMDCVVNGIEARKLILQNCQFIRPFVPETVDGRPWESASTAHIATNLRFFHFVPGEQWHA
FEGYAEHQYFIDPCKLLLTTPGINARTGEYEDFGVPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDMGKLQQLVAQLVRFERLLQTDAPLKEVLPSICKQYPERYAGYTLRQICLEMH
ELYARHNVKQLQKEMFRKAYFPRVMMNPQEANIAYLRGEVELVSLHDAEGRIAAEGALPY
PPGVLCVVPGEVWGGSVLRYFAALEEGINLLPGFAPELQGVYVEECDGRKQVRCYVIKQP
AAQPVLLKGEKL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgttaaaaattgccaccagccgcacctgcccgcactgctttaccacgacccgc
gatatggtggacgtgaacgactcggattatattgatgtcgccgcagtagtcctggcggtg
agcgatatttccaatggtactatagaaaaaatagatgccacggggttcaatattcccgtt
tttatttccacgcataaagaagagattgttccggcagagtatttatcgcgtatccagggc
gtttttgaatgtaccgataactgcaatgacttctacggccgccagctggaagcagctgcg
cagaagtatgaaacccagctgcgtccccccttcttccgcgcgctggtagattatgttaag
caaggcaacagcgcttttgactgcccgggacatcagggtggacagttcttccgccgccac
cctgcgggaaatcaatttgtcgatttctttggcgaaacgctgttccgcgccgacctgtgc
aatgctgacgtggcaatgggcgatctgctgatccacgaaggcgcgccgtgtactgctcaa
cagcatgcggcgaaagtctttaatgccgataaaacctacttcgtactgaacggaacctct
tcgtctaataaggtcgtgctgaacgccctgctcacaccgggcgatctggtgctgttcgat
cgtaataaccataaatctaaccatcacggggcactgttacaggcgggcgctacgccggtt
tatctggaaactgcacgaaatccgtacggctttatcggcggtattgacgcacactgtttt
gaagagcgttatctgcgcgaacggatcgctgaggttgcgccaggccgtgcccgcgatcag
cgtccgttccgcctggcggtgatccagttgggcacttacgatggcaccatctataacgcc
cgccaggtcgtggataagattggtcacctgtgcgattacattctgtttgattctgcctgg
gtggggtacgagcagttcattccgatgatggcggactgctctccgctgctgctggaactg
aacgagaacgaccctgggatcctggttacccagtcggtgcataagcagcaggcaggcttc
tcgcagacctcgcagatccacaagaaagaccggcatatcaaaggccagccgcgctatgtt
ccgcataaacggcttaacaacgcttttatgatgcacgcttccaccagccccttctatccg
ctgtttgccgcgctggatatcaacgcccgtatgcatgagggccagagcggtcgcaatatg
tggatggattgcgtggtgaacggcatcgaggcgcgcaagctgatcctgcaaaactgtcag
tttatccgtccgttcgtaccggaaacggtggatgggcgtccgtgggaaagcgccagcacc
gcccacatcgccaccaacctgcgcttcttccactttgttccgggtgagcaatggcacgct
tttgaaggctacgccgagcaccagtactttatcgatccgtgcaagctgctgctaaccacc
ccgggcatcaatgcgcgcaccggggagtatgaggatttcggcgtgccagccaccattctg
gctaacttcctgcgtgaaaatggcatcgtcccggaaaaatgcgatctcaactcaattctc
ttcctgcttacgccagcagaggacatgggcaaactgcagcagcttgtcgcccagcttgtg
cgcttcgagagactgctccagaccgatgccccgctgaaagaggttctgccatccatctgc
aaacagtacccggaacgctatgccggttacaccctgcgccagatttgcctggagatgcat
gaactttatgcccgccataacgtgaagcaactgcagaaagagatgttccgtaaggcgtat
ttcccgcgggtgatgatgaacccacaagaggcgaacattgcctatctgcgtggcgaagtc
gaactggtctcgctgcacgacgcggaaggccggattgccgccgaaggggcgctcccctat
ccaccgggggtgctgtgcgtggtcccgggcgaagtatggggcggttccgtgctgcgctac
tttgccgcgcttgaagaggggatcaacctgctgccgggctttgcaccggagttacagggg
gtgtacgtcgaggagtgtgacggtcgcaaacaggtgcgctgctacgtcatcaaacaacct
gccgctcagcctgtgctgctgaaaggagaaaaattatga
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