Leclercia sp. Colony189: GNG29_06580
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Entry
GNG29_06580 CDS
T06321
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ler
Leclercia sp. Colony189
Pathway
ler00020
Citrate cycle (TCA cycle)
ler00190
Oxidative phosphorylation
ler00650
Butanoate metabolism
ler00720
Other carbon fixation pathways
ler01100
Metabolic pathways
ler01110
Biosynthesis of secondary metabolites
ler01120
Microbial metabolism in diverse environments
ler01200
Carbon metabolism
Module
ler_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ler_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ler_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GNG29_06580 (sdhA)
00650 Butanoate metabolism
GNG29_06580 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
GNG29_06580 (sdhA)
00720 Other carbon fixation pathways
GNG29_06580 (sdhA)
Enzymes [BR:
ler01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GNG29_06580 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
QGW16219
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Position
1399275..1401041
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT
HDDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNEDGAIVGC
TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHLQ
ESIAEQGPLRDATEANIEASLERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAM
AKGLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAH
SRFDFPDRDDENWLCHSLYLPETESMTRRSVNMEPKLRPAFPPKIRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttccagtcagagaatttgacgctgtagtgattggcgctggcggcgcaggtatg
cgcgcggcgctgcaaatttcccagagcggccagacctgtgcgctgctctctaaagtgttc
ccgacccgttcccataccgtatctgcgcagggtggcatcaccgttgcgctcggtaatacc
catgatgataactgggaatggcatatgtacgacacggtgaaaggctccgactatatcggt
gaccaggacgccattgaatatatgtgtaaaaccggcccggaagcgattctggagcttgac
cacatggggctgccgttctcccgcctggagaacggcaccatctatcaacgtccgtttggc
ggccagtcgaagaacttcggcggcgagcaggcggcacgtacagcggcggctgcggaccgt
accggtcacgccctgttgcacacgctgtaccagcagaacctgaagaacaaaaccaccatc
ttctccgagtggtatgcgctggatctggtgaaaaacgaagatggcgccatcgtcggttgt
accgccctgtgcattgaaaccggtgaagtagtctacttcaaagcccgtgccaccgtgctg
gcgaccggcggcgcaggccgtatttatcagtccactacgaacgcccatatcaacaccggt
gacggcgtcggtatggctatccgcgctggcgtaccggtgcaggatatggagatgtggcag
ttccacccaaccggtatcgccggtgcgggcgtgctggtaacagaaggctgccgcggtgaa
ggcggctacctgctgaacaaacatggcgagcgcttcatggagcgttatgccccgaatgcg
aaagacctggcgggtcgtgacgtggtggcgcgttctatcatgatcgaaatccgtgaaggc
cgcggctgcgacggtccatggggcccgcacgcgaagctgaaattggatcatctgggtaaa
gaggttctggaatcccgtctgccgggcatcctggaactctcccgtaccttcgctcacgtc
gacccggttaaagagccgatcccggttatcccaacctgtcactacatgatgggcggtatt
ccgaccaaagtgaccggccaggcgctgaccgtgaacgagcagggcgaagatgtggtgatc
ccgggcctgtttgcggtaggcgaaattgcctgcgtatccgtacacggcgccaaccgtctg
ggcggcaactctctgctcgacctggtggtgtttggtcgtgcggtcggtctgcatctgcag
gagtccattgccgagcaggggccactgcgtgatgccaccgaagcgaatattgaagcctct
ctggaacgtctcaaccgctggaacggcaaccgtaacggcgaagatccggtggaaatccgt
aaagcgctgcaggagtgcatgcagcacaacttctcggtattccgtgaaggtgacgcgatg
gccaaaggtcttgagcagctgaaagcgatccgcgagcgtctgaaaaatgcccgtctggac
gacacctccagcgagttcaacacccagcgcgttgagtgcctggagctggataacctgatg
gaaaccgcatacgcaacagcggtctctgcaaacttccgtaccgagagccggggcgcccat
agccgcttcgacttcccggatcgtgatgatgaaaactggctgtgccactccctgtatctg
ccagagacggaatccatgacgcgacgcagcgtcaatatggaaccgaaactgcgtccggcg
ttcccgccgaagattcgtacttactaa
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