Leclercia sp. Colony189: GNG29_06960
Help
Entry
GNG29_06960 CDS
T06321
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ler
Leclercia sp. Colony189
Pathway
ler03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GNG29_06960 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ler03019
]
GNG29_06960 (rhlE)
Enzymes [BR:
ler01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GNG29_06960 (rhlE)
Messenger RNA biogenesis [BR:
ler03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GNG29_06960 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
AAA_19
DUF6482
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QGW16286
LinkDB
All DBs
Position
1475710..1477071
Genome browser
AA seq
453 aa
AA seq
DB search
MSFDTLGLNPEILRAVAEQGYREPTPIQQQAIPAVLAGRDLMASAQTGTGKTAGFTLPLL
QRLISSEPHAKGRRPVRALILTPTRELAAQVGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIALEGYDVDPSIKAEPIQNGRQGGRGQGGGRGQGGGGRGQQQPRRSEGGA
PKAANKPPRRDGEGKPAGEGQRRRRPRKPSAAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatacccttggcctgaacccggaaattctgcgcgctgtagcggagcagggt
taccgcgaaccgacccctatccagcagcaggccattcctgctgtactggcaggccgcgat
ctgatggccagcgcccagaccgggaccggtaaaactgccggctttaccctgccgctgctg
caacgcctcatctcaagcgaaccgcacgccaaaggccgtcgcccggtacgcgccctgatc
ctgaccccaacccgtgaactggccgcccaggtgggtgagaacgtgcgtgagtacagccgc
tatctcaacatccgctcgctggtggtgtttggcggggtgagcatcaacccgcagatgatg
aaactgcgcggcggcgtggacgtgctgatcgccaccccgggccgcctgctcgacctggaa
caccagaacgccgttaagctcgacagcgtggagatcctggtgctcgacgaagccgaccgc
atgctggacatgggctttatccacgatattcgtcgcgtgctggcaaaattgccggcccgc
cgtcagaacctgctcttctctgcaaccttctccgacgagatcaaaggcctggcggaaaag
ctgctgcacaatccgctggaagtggaagtggcgcgtcgcaacaccgcctccgaacaggtg
acccagcatgttcactttgttgataaaaagcgcaagcgcgaactgctctcccagatgatt
ggcgaaggcaactggcagcaggtgctggtctttacccgtaccaagcacggggcgaaccac
ctggcggaacagctgaacaaagacggcatccgcagcgcggccatccacggaaataagagc
cagggggcacgtacccgcgcgctggccgatttcaaatcgggtgatatccgcgtactggtg
gcaaccgacatcgccgcccgcggcctggatatcgaagagctgccgcacgtggtgaactac
gagctgccgaacgtcccggaagattatgtccaccgtatcggccgtaccggtcgcgcggcg
gcaacaggcgaagcgctgtcgctggtctgtgttgatgagcacaagctgctgcgcgacatt
gaacgcctgctgaaaaaagagatcccgcgtatcgccctcgagggctatgacgttgatccg
tccatcaaggccgagccgatccagaacgggcgtcagggcgggcgtggtcagggcggtgga
cgcgggcagggcggcggtggacgtggtcagcagcagccgcgccgtagcgaaggcggcgcg
ccgaaagcggcaaataaaccgccgcgtcgcgatggcgagggcaaaccggcgggtgaaggc
cagcgtcgacgccgtccgcgcaagccgtcagcagcgcagtaa
DBGET
integrated database retrieval system
