Leclercia sp. Colony189: GNG29_07225
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Entry
GNG29_07225 CDS
T06321
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ler
Leclercia sp. Colony189
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ler03009
]
GNG29_07225 (rimO)
Enzymes [BR:
ler01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GNG29_07225 (rimO)
Ribosome biogenesis [BR:
ler03009
]
Prokaryotic type
ribosomal protein modification factors
GNG29_07225 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QGW16339
LinkDB
All DBs
Position
complement(1537345..1538670)
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AA seq
441 aa
AA seq
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MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDNADMVIVNTCGFIDSAV
QESLEAIGEALTENGKVIVTGCLGAKVDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR
LADAGVKELLVISQDTSAYGVDVKHRAGFHNGEPVKTSMVGLCEQLAKLGIWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPDLTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEIKEERW
NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETKVKP
GDIVRVKVENADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgttacgcaccagccgaaaatcggcttcgtctctctgggctgcccgaaaaac
ctggtggattccgaacgtatcctgaccgagcttcgcaccgaaggctatgacgtggtacca
agctacgacaacgccgatatggtgatcgttaacacctgcggctttatcgacagcgccgta
caggagtctctggaagccatcggtgaagcactcaccgaaaacggcaaggtgattgtcacc
ggttgcctgggtgccaaagtcgatcagatccgcgaagtccaccctaaggtgctggaaatc
accggtccgcacagctatgagcaggtgctggaacatgtgcaccactacgtgccaaaacca
aagcacaacccgttcctgagcctggtgccggaacagggcgtgaagctgaccccgcgtcac
tatgcgtacttaaaaatttccgaaggttgcaaccatcgctgcaccttctgcattatcccg
tcgatgcgtggcgatctggtgagccgtccgattggtgaagtgctggccgaagccaaacgt
ctggccgatgcgggcgtaaaagagctgctggtgatctcccaggacacctccgcctacggc
gtggacgtgaagcaccgtgccggcttccacaacggcgagccggtgaaaaccagcatggtc
ggcctgtgcgaacagctcgctaagctcggcatctggacgcgtctgcactacgtctaccct
tacccgcacgtggacgacgtgatcccgctgatggcggaaggcaaaatcctgccgtatctg
gatatcccgctgcagcacgccagcccgcgcatcctgaagctgatgaagcgtcctggctcc
gttgaccgccagctggcgcgcatcaagcagtggcgtgaaatctgtccggatctgaccctg
cgctccacctttatcgtcggcttcccgggtgaaaccgaagaagatttccagatgctgctc
gatttcctgaaagaagcccgtctggatcgcgtgggctgcttcaagtacagcccggttgaa
ggcgcgaccgccaacgaactggcggatcaggtgccggaagagatcaaagaagagcgctgg
aaccgcttcatgcagctgcaacagcagatctctgctgaacgtctgcaggagaaagtgggc
cgcgagattctggtgatcatcgacgaagtggatgaagaaggcgccattggccgcagcatg
gccgacgccccggaaatcgacggtgcggtctacctgaacggtgaaacgaaggtgaaaccg
ggcgatatcgtgcgcgtgaaggttgaaaatgctgacgaatatgacctgtggggcagccgg
gtttaa
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