Leclercia sp. Colony189: GNG29_07745
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Entry
GNG29_07745 CDS
T06321
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ler
Leclercia sp. Colony189
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ler03032
]
GNG29_07745 (ihfB)
03036 Chromosome and associated proteins [BR:
ler03036
]
GNG29_07745 (ihfB)
03400 DNA repair and recombination proteins [BR:
ler03400
]
GNG29_07745 (ihfB)
DNA replication proteins [BR:
ler03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GNG29_07745 (ihfB)
Chromosome and associated proteins [BR:
ler03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GNG29_07745 (ihfB)
DNA repair and recombination proteins [BR:
ler03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GNG29_07745 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
MDMPI_C
HU-DNA_bdg
HU-CCDC81_euk_1
HAAS
Motif
Other DBs
NCBI-ProteinID:
QGW16440
LinkDB
All DBs
Position
1657824..1658111
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AA seq
95 aa
AA seq
DB search
MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMATTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYGN
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgattgaaagacttgccagccagcaatcgcatatacctgcgaaa
gcagtggaagatgccgtaaaagagatgctggagcatatggctaccactcttgcacagggc
gagcgcattgaaatccgcggtttcggtagtttttctctgcactatcgtgctccacgtacc
gggcgtaacccgaagactggtgacaaagtagagctggaaggtaaatacgttccgcacttt
aagccgggtaaagagctgcgcgatcgcgccaatatttacggcaactga
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