Leclercia sp. Colony189: GNG29_12420
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Entry
GNG29_12420 CDS
T06321
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ler
Leclercia sp. Colony189
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ler03016
]
GNG29_12420
Enzymes [BR:
ler01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GNG29_12420
Transfer RNA biogenesis [BR:
ler03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GNG29_12420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
QGW17309
LinkDB
All DBs
Position
2624710..2626644
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
TAVIHSEKDRESAEPEELIEPFLTRFVGKVLRKDDRLSIIPDHPLLKDAIPCRAERGVTH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGEDHFVPWWVTLARHNLEKEAPEGAAT
DMLDEGLERRDLTALNFVTIDSASTEDMDDALYVEEQADGKLLLTVAIADPTAWIAEGTP
LDDAAKIRAFTNYLPGFNIPMLPRELSDNLCSLRANEVRPVLACRMSIAADGTIEENIEF
FAALIESKAKLVYDEVSDWLENSGSWQPENEAIADQIRLLHRVCLSRSEWRKTHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHTGFD
PANSEALAALLKTHDVHVDPQEVLTLNGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIVKGETIARPQDEATVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTETRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVAYKVTEVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgcca
cgtgctgaaggggtcgtaaaagccacggaaaaaggctttggcttcctagaagtcgatgcg
cagaaaagttacttcattccgcctccgcagatgaagaaagtgatgcacggcgatcgcatt
acggccgtgatccatagcgaaaaggatcgtgaatcagccgagcctgaagaattaattgaa
ccgttcctgacccgttttgtgggtaaggtgctgagaaaagatgaccgtctgtccatcatt
ccggaccatcctctgctgaaagacgccatcccctgccgcgctgagcgtggcgtgacgcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcaccctctgaagggcgat
cgcggtttttatgccgaactcacccagtttatcaccttcggtgaagaccatttcgtaccg
tggtgggtcacccttgcccgccataatctggaaaaagaggcgccagaaggcgcagcgact
gacatgctggacgaaggtcttgagcgtcgcgatctgactgcactgaattttgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgttgaagagcaggctgacggt
aaactgctgctaaccgtagcgattgccgatcctacagcctggatcgcggaaggtaccccg
ctggatgacgcggcgaaaatccgtgcctttaccaactatctgccaggcttcaacatcccg
atgctgccgcgcgagctgtcggataatctctgctcgctgcgcgctaacgaagtgcgcccg
gtactggcctgccgcatgtccatcgctgccgatggcactatcgaagagaacattgagttc
tttgctgcgctgatcgagtctaaagccaagctggtgtacgacgaggtctctgactggctg
gaaaacagcggtagctggcagcctgagaatgaggccattgccgaccagatccgcctgctg
caccgtgtctgtctgagccgtagcgaatggcgtaagacccatgcgctggtctttaaggat
cgccctgactaccgtttcattctcggtgagaaaggcgaagtgctggatatcgtggcggag
ccgcgtcgcattgctaaccgcatcgttgaagagtcgatgattgcggcgaacatctgcgcg
gcccgcgtactgcgcgacaaactcggtttcggtatctataacgtgcataccgggtttgat
ccggctaacagcgaagccctggcggccctgctgaaaacccatgacgtgcatgtggatccg
caggaagttctgaccctgaatggcttctgcaagctgcgccgtgaactggatgcccagcca
tctggtttcctggacagccgcattcgtcgcttccagtctttcgctgagatcagcaccgaa
cctggcccgcactttggtctggggctggaagcctacgccacctggacctcaccgattcgt
aagtatggcgatatgattaaccaccgcctgctgaaagcgatcgttaaaggcgaaaccatt
gcccgtccacaggacgaagccacggtgcagatggccgagcgccgtcgccttaaccgcatg
gctgaacgcgacgtcggtgactggctctacgcccggttcctgaaagacaaagccggaacg
gagacccgtttcgcggcggagatcatcgatgtcagccgtggcggcatgcgtgtgcgtctg
gtggataatggcgccgtagcctttattcctgcgccgttcctgcacgccgtacgtgacgag
cttgtctgcagccaggaaaacggcaccgtgcaaatcaagggcgaagtggcctataaagtg
accgaagttatcgacgtcactattgctgaagtgcgcatggaaacacgcagcattattgcc
cgccctgccgtctga
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