Leclercia sp. Colony189: GNG29_18490
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Entry
GNG29_18490 CDS
T06321
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ler
Leclercia sp. Colony189
Pathway
ler03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GNG29_18490 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ler03400
]
GNG29_18490 (recB)
Enzymes [BR:
ler01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GNG29_18490 (recB)
DNA repair and recombination proteins [BR:
ler03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GNG29_18490 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QGW18425
LinkDB
All DBs
Position
complement(3882138..3885683)
Genome browser
AA seq
1181 aa
AA seq
DB search
MTDTAESLNPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFSRPLNVEELL
VVTFTEAATEELRGRIRANIHELRIACLRQSTDNPLYASLLDEIDDKQQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESQLRYQACADFWRRHCYPLPRDIA
EAVHNLWKGPDELLRTIDRYLQGEAPVIKSAPPADETLASRHEKIVGLIAAMKQQWSDSV
AEIEAVIERSGIDRRKFNRGNQAKYIERVTAWAQEEKHSYQLPDALEKFSQSFLAERTKA
GGEVPEHPLFSAIDNLLAEPLTLNDLMITRALSEIREAVAREKRRRGELGFDDMLSRLDD
ALNSDNGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGDPKQAIY
AFRGADIFTYMKARGEVAAHYTLDTNWRSAPGMVESVNTLFSQMNDAFMFREIPFLPVKS
APRNATLRFEYKGDFQPAMRIWLMEGEGCGVGDYQTFMAQHCAAQIRDWLSAGVRGEAIL
HRGDDAQPVKASDITVLVRSRQEAALIRDALTLLGIPSVYLSNRDSVFETLEAQEMLWLL
QAVLAPERESTLRSALASAMLGLNAQDIDTLNNSETLWDEAVEEFTRYRERWQKRGVMAM
LRDLMTQRNIAENMLATAGGERRLTDILHISELLQEAGAQLESEYALVRWLAQHIAEPNS
NASSQQMRLESDKHLVKIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRKTFEAVLDL
SKADDSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGEKSGDSDVHLSALGR
LIQRGEPKDAAGLRQCLEALCNDHIALQVADVADAARWHMPDPVMPDLQARQVARMLYDD
WRVTSYSGLQQHGHSIAQDLMPRLDVDAAGTGEVPQEPELTPHQFPRGASPGTFLHSLFE
ALDFTQPVSPEWVLEMLQKGGYDARWEPVLTRWIAQVLETPLNEEGISLSQLTAADKQVE
MEFYLPIAGPLTAGALDALIREYDPLSRGCPPLDFRQVRGMLKGFIDLVFRHNGRYYLLD
YKSNWLGENSEAYTPQAMARAMQSHRYDLQYQLYTLALHRYLRHRIADYDYQQHFGGVIY
LFLRGVDGSSPGAGCFATRPDEALIEQMDSLFSASNEELTQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtcccttaaccccttacgtttaccgttacagggggagcgactg
atagaggcctcagcgggaaccggaaaaaccttcaccatcgctgcactctatctgcgactg
ctgctcggtctgggcggcagcgcggcgtttagccgcccgctcaacgtggaagagctactg
gtggtgaccttcaccgaagccgcgacggaagagctgcgcggacgtatccgcgctaacatc
catgagctgcgcatcgcctgcctgcggcagagtacagataacccgctgtatgccagcctg
ctggatgagattgacgataaacagcaggcggcacagtggctgctgctggcggaacggcag
atggatgaggctgccgtgtttactatccacggcttctgccagcgcatgctcagcctgaat
gcgtttgaatcaggcatgctttttgagcagcaacttatcgaagatgaatcccagctgcgc
taccaggcgtgcgccgacttctggcgtcgccattgctaccccctgccacgtgatatcgcc
gaagcggtacacaatctctggaaaggcccggacgagctactgcggaccatcgatcgctat
ctgcagggggaagccccggtcatcaaatctgccccgcctgcggacgaaacgctggcttca
cgccatgagaagattgtcggcctgatcgccgccatgaaacagcagtggtctgacagcgtg
gcggaaatcgaggcggtgattgaacgctccggcatcgatcggcgtaaattcaaccgcggc
aaccaggcaaaatatatcgagcgcgttacggcctgggcgcaggaagagaagcacagctat
cagttgcctgacgcgctggaaaaattctcccagtcgttccttgccgagcgcacgaaagcg
gggggcgaggtaccggaacacccgctcttttccgccatcgataacctgctggcagagccg
ttaacccttaacgatctgatgatcacccgtgcgctgtcagagatccgcgaagcggtggcg
cgggaaaagcgccgtcgcggtgagctgggcttcgacgatatgctcagccgtctcgatgat
gccctcaacagcgacaatggcgaggcgctggctgccgccatccggacccgttttccggtg
gcgatgatcgatgaatttcaggataccgatccccagcagtaccggattttccgccgcatc
tggcgccagcagccggataccgccctgctgctgattggcgacccgaaacaggcgatctac
gccttccgtggggcggatattttcacctacatgaaagcgcgtggcgaagtggccgcgcac
tatacgctggataccaactggcgttcggcgcccggcatggtggagagcgtgaatacgctc
ttttcacagatgaacgatgctttcatgttccgtgaaatccccttcttaccggtcaaatct
gccccgagaaacgccacgctgcgtttcgagtataaaggcgatttccagcccgcgatgcgc
atctggctgatggagggcgaggggtgtggcgtcggagattaccagacctttatggcccag
cactgtgcggcgcaaatccgcgactggctgagcgctggcgtgcgcggcgaagccattctg
caccggggcgacgatgcccaaccggtaaaggcgtcagacattacggtgctggtgcgcagc
cgtcaggaggcggcgttgatccgtgatgcgctgaccctgctgggcattccttcggtctat
ctctccaaccgcgacagcgtatttgaaacgctggaagcccaggagatgctctggctgtta
caggcggtgctggcgccggagcgtgaaagcaccctgcgcagcgccctggcaagcgccatg
ctcggccttaacgcccaggatatcgatacgctgaataacagtgagacactctgggatgag
gcggtggaagagtttacccgctaccgtgagcgctggcagaagcggggcgtaatggcgatg
ctgcgcgacctcatgacccagcgcaacatcgccgaaaatatgctggcgaccgccggaggg
gaacgccgcctgaccgatattctgcatatcagcgaactgttgcaggaggcgggggcccag
cttgagagtgaatatgccctcgtgcgctggctggcgcagcacattgccgagccgaacagc
aacgcctcaagccagcaaatgcgtctcgaaagtgacaagcatctggttaaaatcgtcacc
attcacaaatcgaaagggctggagtatcccctggtctggttgcctttcattgccaactac
cgggttcaggatcaggccttttatcacgatcgtaagaccttcgaagcggtgctcgacctc
agcaaggccgatgacagcgtggagctggccgaagctgaacggctggcggaagatttacgc
ctgctctatgtggcactgacccgttcggtgtggcactgcagcttaggcgtggcgccgctg
ttccgtcggcgtggcgaaaaatcgggtgacagcgacgtccacctgagcgcgcttggacgc
ctgatccagcgcggcgagccgaaagatgccgccggtctgcgccagtgtctggaggcgtta
tgcaatgaccacattgcattgcaggttgccgatgtggcagacgccgcccgctggcatatg
ccggatccggtgatgccggatctgcaggcgcggcaggtggctcgcatgctgtatgacgac
tggcgggtcaccagctattccggacttcagcagcacgggcacagtatcgcccaggatctg
atgccgcgcctcgatgttgatgccgcaggcaccggcgaagtgccgcaggagccagagctg
acgccgcatcagtttccgcgcggcgcctcgccgggcacctttttacacagcctgtttgaa
gcactcgattttacgcagcccgtctccccggagtgggtgctggagatgctgcaaaaaggg
gggtacgatgcccgctgggagccggtgttaacccgctggatcgcgcaggtgctggaaact
ccgctcaatgaggaggggatctcactgagccagctgacagccgctgataagcaggttgag
atggagttttatctgcccatcgccgggccgctcaccgccggggcgctggatgcgttgatc
cgcgagtacgatccactctcccggggctgcccgccgctcgattttcgtcaggtgcgcggc
atgctgaaaggctttatcgacctggtcttccgccataatggccgctattacctgctggac
tataaatccaactggctgggtgaaaacagcgaggcctataccccgcaggctatggcccgg
gcgatgcagtcgcaccgctacgatctgcagtaccagctctataccctggcgctgcaccga
tatttacgtcaccgtattgccgactatgactatcaacaacatttcggtggggtgatctac
ctgtttttacgtggcgtcgatggcagctcgccgggcgccggttgctttgccacccgtccg
gatgaagcgttaatcgaacaaatggatagcctgttttccgccagcaacgaggagctaaca
caatga
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