Leclercia sp. Colony189: GNG29_18995
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Entry
GNG29_18995 CDS
T06321
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ler
Leclercia sp. Colony189
Pathway
ler00040
Pentose and glucuronate interconversions
ler01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GNG29_18995
Enzymes [BR:
ler01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
GNG29_18995
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
QGW18521
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Position
complement(3990930..3992108)
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AA seq
392 aa
AA seq
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MAKGMKVQLHFEHYIDEDTGAKVTRFTPVDVICHRNYFYQKCFIDGGRKLIFTGEFDVNR
NYYLLDLATGIAMQLTEGAGDNTFGGFLSPDETSLYYVKSERNLMRINLSTLQEEIVYQV
PEEWVGYGTWVANSACNKLVGVEIHRDSWRPISDWTVFQTFWAEQPRCRVIRIDLHTGER
TTLLEENQWLGHPIYRPFDDNTVAFCHEGPLDRVDARMWLMDEDGSNIRKARQPAPGESY
THEFWVPDGSALMYVTYVKNSPVRYLCRIDGQSGQDERLMAMPPCSHVMSNEDGSLAVGD
GSGVPIDIADNAGYGDTSDPYLWLFDLRKKQAYKIARHSSSWQVLDGDRQVTHPHPSFTP
DEKAVLFSTDKDGKPALYLAEIPPEVLQNIKA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggtatgaaggtgcaattacattttgaacactatatcgatgaggataccggc
gctaaagttacccgcttcacgcctgttgatgttatttgtcatcgtaattacttttaccag
aaatgttttattgatggcggcaggaaattaatttttaccggtgagttcgatgttaaccgc
aactattatttgctggatctggcgacgggtatagcaatgcaattaacggaaggcgcgggc
gataatacctttggcggctttttatcaccggatgaaacttcgctctattatgttaaaagc
gaacgcaatttaatgcggataaatctgtcgacgctgcaggaagagatcgtttatcaggtg
ccggaagagtgggtgggatatggcacctgggtggcgaacagcgcctgcaataagcttgtc
ggcgtggagatccatcgcgacagctggcggccaattagcgactggaccgtcttccagacc
ttctgggccgagcagccgcgctgtcgggttatccgcatcgatctacatacaggggagaga
accacgctgctggaggagaatcagtggctggggcatccgatttatcgaccctttgatgac
aacaccgtggccttctgccacgagggtcctttggaccgggtcgatgcccgtatgtggctg
atggatgaagatggcagcaatattcgtaaagccagacagcccgctcccggggagagctat
acccatgaattctgggtgccggatggctcggcgctgatgtacgtcacctatgtgaaaaac
agccctgtgcgctatttatgccgtattgatggtcagagcggtcaggacgaacgtctgatg
gcgatgcccccctgttcgcacgtcatgagtaacgaagatggctccctcgccgtaggcgac
ggttccggcgtgcccattgatatcgccgataacgccggctatggcgataccagcgatccc
tacctgtggttatttgatttgcggaaaaagcaagcctacaaaatcgcccgtcacagctca
tcctggcaggtgctggacggcgatcgccaggtgacgcatccgcacccctcgtttacgccg
gacgaaaaagcggtgctgttcagcacggataaagacggtaaaccggcgctctatctggcc
gagatcccgcctgaggttttgcaaaacattaaggcttaa
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