Leclercia sp. Colony189: GNG29_20175
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Entry
GNG29_20175 CDS
T06321
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ler
Leclercia sp. Colony189
Brite
KEGG Orthology (KO) [BR:
ler00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ler03016
]
GNG29_20175 (truB)
Enzymes [BR:
ler01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GNG29_20175 (truB)
Transfer RNA biogenesis [BR:
ler03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GNG29_20175 (truB)
Prokaryotic type
GNG29_20175 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QGW18733
LinkDB
All DBs
Position
complement(4237206..4238150)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPVTFSSEQLDAALESFRGDTQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPAERMVTLEQLQALVDQAQEQGTEAADLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTNVPAQGLVRVTEGDDNTFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtgcacggcgtgctgctgctggataaaccg
cagggtgcatccagcaacgacgtgctgcaaaaagttaagcgtatatataacgccaaccgc
gcggggcacaccggggcgctggatccgctggcgaccggtatgctgccgatttgtctgggt
gaagcgaccaagttttcccagtatctgctggattcggacaaacgctaccgcgtgattgca
aagcttggccagcgcacggacacctccgatgccgatggtcaggttgtcgaagagcgtccg
gtgacgttcagcagcgaacagcttgatgccgcgctcgagagcttccgtggcgacacccaa
caggtgccgtccatgtactcggcgctgaagtatcagggcaaaaagctctatgagtatgcg
cgtcaggggattgaggtgccacgcgaggcccgtccgattacggtctatgagctgctattc
attcgtcacgaaggcgatgagctggagctggaagtgcattgctcaaaaggcacctatatc
cgcaccatcatcgacgatctgggtgagaagctgggctgtggcgcgcacgttatttatctg
cgtcgtctggcagtcagcaagtacccggctgaacgtatggtgacgctggagcagctgcag
gcgctggtggaccaggcgcaggagcagggcacagaggctgcggacctgcttgacccatta
ctgatgccaatggacagtcctgcttcggactatccggttgtcaatctgccgctgacctcc
tccgtttactttaaaaacggcaacccggtgcgcacgacgaatgtcccggcgcaagggctg
gtgcgcgttacggaaggggatgacaacacctttatcgggatgggtgaaatcgacgacgaa
ggtcgtgttgccccacgccgtctggtggttgaatatccggcataa
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